RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CCL16O15467 120 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GYPCP04921 128 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 POU2F2P09086 479 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 VDRP11473 427 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CD19P15391 556 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 KCNA5P22460 613 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ADORA2BP29275 332 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ELF1P32519 619 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ZNF75DP51815 510 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PKDCCQ504Y2 493 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 FIGNQ5HY92 759 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SMYD5Q6GMV2 418 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CCDC149Q6ZUS6 474 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SLC47A2Q86VL8 602 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SMRP1Q8NCR6 262 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 OLIG1Q8TAK6 271 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PRKD2Q9BZL6 878 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CSNK1G1Q9HCP0 422 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 KRT82Q9NSB4 513 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DAAM1Q9Y4D1 1078 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GRXCR2A6NFK2 248 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HHLA1C9JL84 531 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 F8VP50 259 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TULP2O00295 520 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CBFA2T2O43439 604 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 AP1G2O75843 785 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GFPT2O94808 682 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SSTR3P32745 418 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SOX5P35711 763 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 USP8P40818 1118 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NTHL1P78549 312 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TFF2Q03403 129 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GOLGA7BQ2TAP0 167 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 LCLAT1Q6UWP7 414 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GPR149Q86SP6 731 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TMC8Q8IU68 726 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GIPC2Q8TF65 315 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DDX1Q92499 740 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SUSD6Q92537 303 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HLA-CQ95604 372 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MED10Q9BTT4 135 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ADAM7Q9H2U9 754 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TSPAN16Q9UKR8 245 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MYH10P35580 1976 aa13.16□□□□□ -0.3
HLA-DQB1-203ENST00000399082 OBSL1O75147 1896 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 LRRC53A6NM62 1247 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TNFRSF10BO14763 440 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MICAL2O94851 1124 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GNA15P30679 374 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TUFMP49411 452 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CNGA2Q16280 664 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DENND1BQ6P3S1 775 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GPRIN1Q7Z2K8 1008 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NOP9Q86U38 636 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SCN4BQ8IWT1 228 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HS6ST3Q8IZP7 471 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ZNF606Q8WXB4 792 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SPAG5Q96R06 1193 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TRIM5Q9C035 493 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ZNF334Q9HCZ1 680 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DPP7Q9UHL4 492 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CD207Q9UJ71 328 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NOCTQ9UK39 431 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 KIAA1257Q9ULG3 409 aa13.15□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ZNF638Q14966 1978 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 A0A1W2PQJ5 194 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MBTPS2O43462 519 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MOSPD3O75425 235 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 LRG1P02750 347 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CYP11B1P15538 503 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms