RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 KRT82Q9NSB4 513 aa26.94■■□□□ 1.9
TMEM55B-202ENST00000398020 FAM50BQ9Y247 325 aa26.94■■□□□ 1.9
TMEM55B-202ENST00000398020 F8VP50 259 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 BMP1P13497 986 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 USP8P40818 1118 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 RPL10AP62906 217 aaKnown RBP26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 RAPGEF1Q13905 1077 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 VSTM1Q6UX27 236 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 NECTIN4Q96NY8 510 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 KCNK16Q96T55 309 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 WDR6Q9NNW5 1121 aaKnown RBP26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 CLUHO75153 1309 aa26.93■■□□□ 1.9
TMEM55B-202ENST00000398020 EPHB6O15197 1021 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 AP1G2O75843 785 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 RHOP08100 348 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 POU2F2P09086 479 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 PNMA6AP0CW24 399 aaPredicted RBP26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 UCHL3P15374 230 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 PTPN2P17706 415 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 MTMR3Q13615 1198 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 VEPH1Q14D04 833 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 FILIP1LQ4L180 1135 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 PABPC1LQ4VXU2 614 aaKnown RBP26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 DNAJB7Q7Z6W7 309 aaPredicted RBP26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 PSMG2Q969U7 264 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 JAKMIP2Q96AA8 810 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 ATP8B3O60423 1300 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 A0A1B0GTH6 734 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 NOL4O94818 638 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 SMARCD1Q96GM5 515 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 FAM81BQ96LP2 452 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 NOTCH4Q99466 2003 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 HNRNPABQ99729 332 aaKnown RBP26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 GANQ9H2C0 597 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 PLCB1Q9NQ66 1216 aa26.92■■□□□ 1.9
TMEM55B-202ENST00000398020 BEST1O76090 585 aa26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 ZNF132P52740 706 aa26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 SLC5A9Q2M3M2 681 aa26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 SHC3Q92529 594 aa26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 ERGIC2Q96RQ1 377 aa26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 ACP6Q9NPH0 428 aa26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 MAGED2Q9UNF1 606 aaPredicted RBP26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 DENND4AQ7Z401 1863 aa26.91■■□□□ 1.9
TMEM55B-202ENST00000398020 NRG2O14511 850 aaPredicted RBP26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 MYL4P12829 197 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 ANXA13P27216 316 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 TAF12Q16514 161 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 SGO2Q562F6 1265 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 ITIH5Q86UX2 942 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 TFAP2BQ92481 460 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 RPGRIP1Q96KN7 1286 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 SMOQ99835 787 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 PHF7Q9BWX1 381 aaPredicted RBP26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 ZNF334Q9HCZ1 680 aaPredicted RBP26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 ASAH2Q9NR71 780 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 CNTN6Q9UQ52 1028 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 ASB3Q9Y575 518 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 MYH10P35580 1976 aa26.9■■□□□ 1.9
TMEM55B-202ENST00000398020 FOXN3O00409 490 aaPredicted RBP26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 TRIM66O15016 1216 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 PAEPP09466 180 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 FAM200BP0CF97 657 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 CCR2P41597 374 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 MAP3K7CLP57077 242 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 GET4Q7L5D6 327 aaPredicted RBP26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 ITFG1Q8TB96 612 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 TCEAL4Q96EI5 215 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 NAA15Q9BXJ9 866 aaKnown RBP26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 GPR88Q9GZN0 384 aa26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 DMAP1Q9NPF5 467 aaPredicted RBP26.89■■□□□ 1.9
TMEM55B-202ENST00000398020 SLC38A8A6NNN8 435 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 VDRP11473 427 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 FSHRP23945 695 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 BRD2P25440 801 aaKnown RBP26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 SSTR3P32745 418 aaPredicted RBP26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 UBASH3AP57075 661 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 POLR2FP61218 127 aaKnown RBP26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 DRAP1Q14919 205 aaPredicted RBP26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 TJAP1Q5JTD0 557 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 PDZD4Q76G19 769 aaPredicted RBP26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 TMC8Q8IU68 726 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 ZMIZ2Q8NF64 920 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 NEK11Q8NG66 645 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 ING5Q8WYH8 240 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 C8orf48Q96LL4 319 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 ZSWIM1Q9BR11 485 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 LRRC3Q9BY71 257 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 NLRC4Q9NPP4 1024 aa26.89■■□□□ 1.89
TMEM55B-202ENST00000398020 HMGA1P17096 107 aaKnown RBP26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 GJA1P17302 382 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 NR1I3Q14994 352 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 GOLGA7BQ2TAP0 167 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 CYP4A22Q5TCH4 519 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 ARHGAP17Q68EM7 881 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 CLEC20AQ6ZU45 233 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 IFNKQ9P0W0 207 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 TSPAN16Q9UKR8 245 aa26.88■■□□□ 1.89
TMEM55B-202ENST00000398020 IFRD2Q12894 506 aaPredicted RBP26.87■■□□□ 1.89
TMEM55B-202ENST00000398020 GAS2L3Q86XJ1 694 aa26.87■■□□□ 1.89
TMEM55B-202ENST00000398020 SPATA17Q96L03 361 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms