RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 EAPPQ56P03 285 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 CIAPIN1Q6FI81 312 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 MARK2Q7KZI7 788 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 TAS1R3Q7RTX0 852 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 NME8Q8N427 588 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 SPIRE2Q8WWL2 714 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 LENG1Q96BZ8 264 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 TTC25Q96NG3 672 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 TUBGCP5Q96RT8 1024 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 RMDN3Q96TC7 470 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 BTBD10Q9BSF8 475 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 MAK16Q9BXY0 300 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 FOXP3Q9BZS1 431 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 RHBDL2Q9NX52 303 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 SMG5Q9UPR3 1016 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 TELO2Q9Y4R8 837 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 ZNF862O60290 1169 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 ZWINTO95229 277 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 CD151P48509 253 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 KRT76Q01546 638 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 PLCB3Q01970 1234 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 DEUP1Q05D60 604 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 PDIA2Q13087 525 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 CUL2Q13617 745 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 EFTUD2Q15029 972 aaKnown RBP eCLIP16.74■□□□□ 0.278e-7■■■■■ 33.2
CHMP1A-201ENST00000397901 ZACNQ401N2 412 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 PLEKHA7Q6IQ23 1121 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 LVRNQ6Q4G3 990 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 CCDC125Q86Z20 511 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 KBTBD2Q8IY47 623 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 ST13P4Q8IZP2 240 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 ALLCQ8N6M5 410 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 FEZF2Q8TBJ5 459 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 NAT14Q8WUY8 206 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 TUBB6Q9BUF5 446 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 NPHS2Q9NP85 383 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 SCAF8Q9UPN6 1271 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 IVNS1ABPQ9Y6Y0 642 aa16.74■□□□□ 0.27
CHMP1A-201ENST00000397901 VNN1O95497 513 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 SPATA31D3P0C874 917 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 GARTP22102 1010 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 LIG4P49917 911 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 MTM1Q13496 603 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 TXNRD3NBQ6F5E7 133 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 SPATA31D4Q6ZUB0 917 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 OTOAQ7RTW8 1153 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 NLRX1Q86UT6 975 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 TDRPQ86YL5 185 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 TAB3Q8N5C8 712 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 SAMD3Q8N6K7 520 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 NTPCRQ9BSD7 190 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 TMEM121Q9BTD3 319 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 ETNK2Q9NVF9 386 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 SCINQ9Y6U3 715 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 C4BPAP04003 597 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 ITGA2BP08514 1039 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 PABPC4LP0CB38 370 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 ETS2P15036 469 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 KRT4P19013 534 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 SFNP31947 248 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 CCNFP41002 786 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 GAD2Q05329 585 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 DTX3LQ8TDB6 740 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 SENP7Q9BQF6 1050 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 C12orf65Q9H3J6 166 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
CHMP1A-201ENST00000397901 SGK1O00141 431 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 GSC2O15499 205 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 EXTL3O43909 919 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 TGFB2P61812 414 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 SPATA24Q86W54 205 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 PHF13Q86YI8 300 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 RNF168Q8IYW5 571 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 RCOR2Q8IZ40 523 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 ZNF75CPQ92670 426 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 C10orf88Q9H8K7 445 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 XPNPEP1Q9NQW7 623 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 PARVAQ9NVD7 372 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 PSMC3IPQ9P2W1 217 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 SEPT9Q9UHD8 586 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 F8VP50 259 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 C2CD2LO14523 706 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 TYROBPO43914 113 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 OVGP1Q12889 678 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 MORF4L2Q15014 288 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 RNASEH2BQ5TBB1 312 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 ARHGEF16Q5VV41 709 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 SCARA3Q6AZY7 606 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 TRIM72Q6ZMU5 477 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 SPOCD1Q6ZMY3 1216 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 CENPUQ71F23 418 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 NLRP9Q7RTR0 991 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 MCEEQ96PE7 176 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 POLR3FQ9H1D9 316 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 HSFX1Q9UBD0 423 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 DCTN4Q9UJW0 460 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms