RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TJP2Q9UDY2 1190 aa20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 GREB1Q4ZG55 1949 aa20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 TULP2O00295 520 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 ENC1O14682 589 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 XPO1O14980 1071 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 GABBR2O75899 941 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 ALDH7A1P49419 539 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 TAP1Q03518 808 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 TUBB2AQ13885 445 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 MAPRE1Q15691 268 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 VARS2Q5ST30 1063 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 CYP4A22Q5TCH4 519 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 FAM171A1Q5VUB5 890 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 TMCO2Q7Z6W1 182 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 DAAM2Q86T65 1068 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 FAM35AQ86V20 835 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 IPO4Q8TEX9 1081 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 HSFY1Q96LI6 401 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 TUBB2BQ9BVA1 445 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 ZNF638Q14966 1978 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 TMEM191CA6NGB0 347 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 GJB5O95377 273 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 FTCDO95954 541 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 NPR3P17342 541 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 SNX16P57768 344 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 TSPY1Q01534 308 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 CLEC20AQ6ZU45 233 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 LRRTM3Q86VH5 581 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 FEZF2Q8TBJ5 459 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 HERVK_113Q902F9 699 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 IGSF21Q96ID5 467 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.881e-6■■■■□ 19.3
PDLIM2-205ENST00000397761 ZCWPW1Q9H0M4 648 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 GOLPH3Q9H4A6 298 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 LCMT1Q9UIC8 334 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 ANAPC7Q9UJX3 599 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 SNX12Q9UMY4 172 aa20.56■□□□□ 0.88
PDLIM2-205ENST00000397761 GBF1Q92538 1859 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 SIGLEC16A6NMB1 481 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 NT5C1B-RDH14C9J2C7 533 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 E5RJQ4 531 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 CLDN5O00501 218 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 TBC1D4O60343 1298 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 URI1O94763 535 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 PBX3P40426 434 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 BTG3Q14201 252 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 DNAJC24Q6P3W2 148 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 KCNT2Q6UVM3 1135 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 KCTD13Q8WZ19 329 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 MYLPFQ96A32 169 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 HES6Q96HZ4 224 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 UBXN6Q9BZV1 441 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 CSNK1G1Q9HCP0 422 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 TMLHEQ9NVH6 421 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 MRFAP1Q9Y605 127 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 ALG6Q9Y672 507 aa20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 MRPL42Q9Y6G3 142 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-205ENST00000397761 PLXNA4Q9HCM2 1894 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 FAM200BP0CF97 657 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 LAG3P18627 525 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 SCNN1AP37088 669 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 ACADSBP45954 432 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 PEX26Q7Z412 305 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 PHLDB2Q86SQ0 1253 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 ZDHHC17Q8IUH5 632 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 SLC39A11Q8N1S5 342 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 SMARCD1Q96GM5 515 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 ZNF558Q96NG5 402 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 TMEM209Q96SK2 561 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 VN1R3Q9BXE9 311 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 OXCT2Q9BYC2 517 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 TRIM7Q9C029 511 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 SYNCQ9H7C4 482 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 KRT82Q9NSB4 513 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 CXXC1Q9P0U4 656 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 CDC23Q9UJX2 597 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 SAR1BQ9Y6B6 198 aa20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 COL4A4P53420 1690 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-205ENST00000397761 OR6C75A6NL08 312 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 MYO1FO00160 1098 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 NCK2O43639 380 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 BEST1O76090 585 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 MAN1A1P33908 653 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 RGS7P49802 495 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 SLC8A3P57103 927 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 RPL7AP62424 266 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 ZNF280DQ6N043 979 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 OLFML1Q6UWY5 402 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 PIGZQ86VD9 579 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 ZMIZ2Q8NF64 920 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 FNIP1Q8TF40 1166 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 CD101Q93033 1021 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 SMOQ99835 787 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 MED10Q9BTT4 135 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 ST7Q9NRC1 585 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 TMEM30AQ9NV96 361 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 AMFRQ9UKV5 643 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 MYO16Q9Y6X6 1858 aa20.53■□□□□ 0.88
PDLIM2-205ENST00000397761 ZBBXA8MT70 800 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms