RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 WDTC1Q8N5D0 677 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 C1orf131Q8NDD1 294 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 HDAC7Q8WUI4 952 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 PBKQ96KB5 322 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 LPIN3Q9BQK8 851 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 RBM12Q9NTZ6 932 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 MICAL3Q7RTP6 2002 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 M0QYV0 167 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 SHOX2O60902 331 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 ACAT1P24752 427 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 CXCR5P32302 372 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 NOP2P46087 812 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 FAM117BQ6P1L5 589 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 TMCO2Q7Z6W1 182 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 PHF13Q86YI8 300 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 MREGQ8N565 214 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 FAM76AQ8TAV0 307 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 SPATA18Q8TC71 538 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 RFFLQ8WZ73 363 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 ZNF653Q96CK0 615 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 TMEM175Q9BSA9 504 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 COLEC11Q9BWP8 271 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 TSPAN16Q9UKR8 245 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 PCDHB8Q9UN66 801 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 NCANO14594 1321 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 TRAPPC3O43617 180 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 FGBP02675 491 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 GALTP07902 379 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 PTPN1P18031 435 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 PSMC1P62191 440 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 GOLGA7BQ2TAP0 167 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 ARHGAP17Q68EM7 881 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 ZNF365Q70YC5 407 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 B3GALNT2Q8NCR0 500 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 SLC35G2Q8TBE7 412 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 HTATIP2Q9BUP3 242 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 ADAM22Q9P0K1 906 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 GTF3C4Q9UKN8 822 aa20.41■□□□□ 0.86
PDLIM2-204ENST00000397760 ATP2C2O75185 946 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 TYMPP19971 482 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 MMS22LQ6ZRQ5 1243 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 MON1BQ7L1V2 547 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 UBA3Q8TBC4 463 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 TRIM11Q96F44 468 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 C11orf70Q9BRQ4 267 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 TMEM59LQ9UK28 342 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 ADAM28Q9UKQ2 775 aa20.4■□□□□ 0.86
PDLIM2-204ENST00000397760 GOLGA6CA6NDK9 693 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 ZBBXA8MT70 800 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 ATMINO43313 823 aaPredicted RBP20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 CYP1A2P05177 515 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 GOLGA6DP0CG33 693 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 MYBL1P10243 752 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 SYN1P17600 705 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 MMP8P22894 467 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 C1QBPQ07021 282 aaKnown RBP20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 C2CD6Q53TS8 623 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 RHOT2Q8IXI1 618 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 GSPT2Q8IYD1 628 aaKnown RBP20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 ZNF689Q96CS4 500 aaPredicted RBP20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 VCPIP1Q96JH7 1222 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 CALR3Q96L12 384 aaKnown RBP20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 SYT15Q9BQS2 421 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 OSGEPQ9NPF4 335 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 GOLGA6AQ9NYA3 693 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 CTTNBP2NLQ9P2B4 639 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 CNOT8Q9UFF9 292 aaKnown RBP20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 CDH9Q9ULB4 789 aa20.39■□□□□ 0.86
PDLIM2-204ENST00000397760 NT5C1B-RDH14C9J2C7 533 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 HSF2BPO75031 334 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 CCDC130P13994 396 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 PCSK1P29120 753 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 PBX3P40426 434 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 GPD2P43304 727 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 BCAR1P56945 870 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 PTP4A2Q12974 167 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 RPS6KA1Q15418 735 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 LIN9Q5TKA1 542 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 KIAA0319Q5VV43 1072 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 OVOS1Q6IE37 1185 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 ERICH1Q86X53 443 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 RTP3Q9BQQ7 232 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 CWH43Q9H720 699 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 MARCH5Q9NX47 278 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 HESX1Q9UBX0 185 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 CHORDC1Q9UHD1 332 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 CYTH4Q9UIA0 394 aa20.39■□□□□ 0.85
PDLIM2-204ENST00000397760 RRM1P23921 792 aa20.38■□□□□ 0.85
PDLIM2-204ENST00000397760 ADORA2BP29275 332 aa20.38■□□□□ 0.85
PDLIM2-204ENST00000397760 THEM5Q8N1Q8 247 aa20.38■□□□□ 0.85
PDLIM2-204ENST00000397760 SLC2A14Q8TDB8 520 aa20.38■□□□□ 0.85
PDLIM2-204ENST00000397760 ACTRT1Q8TDG2 376 aa20.38■□□□□ 0.85
PDLIM2-204ENST00000397760 PSMB7Q99436 277 aa20.38■□□□□ 0.85
PDLIM2-204ENST00000397760 ACBD6Q9BR61 282 aa20.38■□□□□ 0.85
PDLIM2-204ENST00000397760 LTBP2Q14767 1821 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 CALB1P05937 261 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 ALDH7A1P49419 539 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 SLC7A5Q01650 507 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 YWHAHQ04917 246 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 TCEAL1Q15170 157 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms