RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 FGF18O76093 207 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 GJB6O95452 261 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 ERBB2P04626 1255 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 FAM200BP0CF97 657 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 CPB1P15086 417 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 CA8P35219 290 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 CACNA2D1P54289 1103 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 PTP4A2Q12974 167 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 MRPL58Q14197 206 aaKnown RBP22.39■■□□□ 1.17
CPNE1-204ENST00000397443 LIN9Q5TKA1 542 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 ANKS3Q6ZW76 656 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 RFFLQ8WZ73 363 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 DUSP16Q9BY84 665 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 ZCWPW1Q9H0M4 648 aa22.39■■□□□ 1.17
CPNE1-204ENST00000397443 ABI2Q9NYB9 513 aaPredicted RBP22.39■■□□□ 1.17
CPNE1-204ENST00000397443 H0YGN5 161 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 GOLGA8SH3BPF8 625 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 SOD2P04179 222 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 TNNT1P13805 278 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 NPR3P17342 541 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 CTNNB1P35222 781 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 PPM1AP35813 382 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 PLCB3Q01970 1234 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 C1QBPQ07021 282 aaKnown RBP22.38■■□□□ 1.17
CPNE1-204ENST00000397443 DNTTIP2Q5QJE6 756 aaKnown RBP22.38■■□□□ 1.17
CPNE1-204ENST00000397443 SPATA2LQ8IUW3 424 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-204ENST00000397443 VPS52Q8N1B4 723 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 KLHL23Q8NBE8 558 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 SP7Q8TDD2 431 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-204ENST00000397443 SLC35F5Q8WV83 523 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 KCNK16Q96T55 309 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 NUP85Q9BW27 656 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 TMEM30AQ9NV96 361 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 COG5Q9UP83 839 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 CDY1Q9Y6F8 540 aa22.38■■□□□ 1.17
CPNE1-204ENST00000397443 E5RJQ4 531 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 H7C4K7 107 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 EFEMP2O95967 443 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 CALB1P05937 261 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 SLC8A3P57103 927 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 PSMD5Q16401 504 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 PTPROQ16827 1216 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 SYT10Q6XYQ8 523 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 CLEC20AQ6ZU45 233 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 RNF168Q8IYW5 571 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-204ENST00000397443 DCP1BQ8IZD4 617 aaKnown RBP22.37■■□□□ 1.17
CPNE1-204ENST00000397443 CLP1Q92989 425 aaKnown RBP22.37■■□□□ 1.17
CPNE1-204ENST00000397443 C18orf8Q96DM3 657 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 TRIM11Q96F44 468 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 WDR24Q96S15 920 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 NCANO14594 1321 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 LINC01553A4QN01 128 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 ARHGEF15O94989 841 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 CYP1A2P05177 515 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 KRT17Q04695 432 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 MAPRE1Q15691 268 aaKnown RBP22.37■■□□□ 1.17
CPNE1-204ENST00000397443 DDX53Q86TM3 631 aaKnown RBP22.37■■□□□ 1.17
CPNE1-204ENST00000397443 SLC35F6Q8N357 371 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 MSANTD4Q8NCY6 345 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 IPO4Q8TEX9 1081 aaKnown RBP22.37■■□□□ 1.17
CPNE1-204ENST00000397443 SMARCD1Q96GM5 515 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 SMOQ99835 787 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 GOLPH3Q9H4A6 298 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 DNAI1Q9UI46 699 aa22.37■■□□□ 1.17
CPNE1-204ENST00000397443 OR6C75A6NL08 312 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 ADAM12O43184 909 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 SETSIPP0DME0 302 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 MYBL1P10243 752 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 LCP1P13796 627 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 CYP2F1P24903 491 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 GLUD2P49448 558 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 PPP1R2P3Q6NXS1 205 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 PIGZQ86VD9 579 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 VCPIP1Q96JH7 1222 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 BTBD6Q96KE9 485 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 C17orf80Q9BSJ5 609 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 MIS12Q9H081 205 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 ALG13Q9NP73 1137 aaKnown RBP22.36■■□□□ 1.17
CPNE1-204ENST00000397443 CHST7Q9NS84 486 aa22.36■■□□□ 1.17
CPNE1-204ENST00000397443 TMEM110-MUSTN1A8MSY1 372 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 URODP06132 367 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 CA3P07451 260 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 C4orf50Q6ZRC1 276 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 ATAD1Q8NBU5 361 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 FBXO22Q8NEZ5 403 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 ZNF564Q8TBZ8 553 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-204ENST00000397443 PIK3R5Q8WYR1 880 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 TRIM7Q9C029 511 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 ATP8B3O60423 1300 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 BTNL10A8MVZ5 291 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 PALMO75781 387 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 OR1D2P34982 312 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 ETF1P62495 437 aaKnown RBP22.35■■□□□ 1.17
CPNE1-204ENST00000397443 OR6B2Q6IFH4 312 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 DNAJC24Q6P3W2 148 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 SCN4BQ8IWT1 228 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 SCUBE3Q8IX30 993 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 RHOT2Q8IXI1 618 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 HERC2P3Q9BVR0 1158 aa22.35■■□□□ 1.17
CPNE1-204ENST00000397443 GBF1Q92538 1859 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms