RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 FAM171A1Q5VUB5 890 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 KCNT2Q6UVM3 1135 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 ZNF365Q70YC5 407 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 HASPINQ8TF76 798 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 MCRS1Q96EZ8 462 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 TMEM169Q96HH4 297 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 MED10Q9BTT4 135 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 SELENOOQ9BVL4 669 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 ZCWPW1Q9H0M4 648 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 L2HGDHQ9H9P8 463 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 CSNK1G1Q9HCP0 422 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 OSGEPQ9NPF4 335 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 CRTAC1Q9NQ79 661 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 SSX2IPQ9Y2D8 614 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 HYOU1Q9Y4L1 999 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 NR2E3Q9Y5X4 410 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 ZBBXA8MT70 800 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 ACRP10323 421 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 PSMC1P62191 440 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 DEFB103AP81534 67 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 PDE4CQ08493 712 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 PIGHQ14442 188 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 VARS2Q5ST30 1063 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 SPOUT1Q5T280 376 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 DCUN1D2Q6PH85 259 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 VSTM1Q6UX27 236 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 OTOP2Q7RTS6 562 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 PCED1BQ96HM7 432 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 CPXM1Q96SM3 734 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 PKMYT1Q99640 499 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 RTP3Q9BQQ7 232 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 TRIM62Q9BVG3 475 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 PLVAPQ9BX97 442 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 ANAPC7Q9UJX3 599 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 PCDHB12Q9Y5F1 795 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 TIMM13Q9Y5L4 95 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 BACE2Q9Y5Z0 518 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 MYH10P35580 1976 aa20.06■□□□□ 0.8
TSPAN4-204ENST00000397404 TCRBV5S1A1TA0A578 114 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 BUB1BO60566 1050 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 GLI1P08151 1106 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 KRT3P12035 628 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 CCDC130P13994 396 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 TKTP29401 623 aaKnown RBP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 GATMP50440 423 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 RPS6KA1Q15418 735 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 PPP1R15BQ5SWA1 713 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 C16orf59Q7L2K0 433 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 FAM35AQ86V20 835 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 XYLT1Q86Y38 959 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 RNF168Q8IYW5 571 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 SCML4Q8N228 414 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 UBL4BQ8N7F7 174 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 NIPA2Q8N8Q9 360 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 UBA3Q8TBC4 463 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 RABGGTAQ92696 567 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 RAD9AQ99638 391 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 DMAP1Q9NPF5 467 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 ST7Q9NRC1 585 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 ASNSD1Q9NWL6 643 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 SPG21Q9NZD8 308 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 CDC23Q9UJX2 597 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 MAFFQ9ULX9 164 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 SNX12Q9UMY4 172 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 COG5Q9UP83 839 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 SLC4A7Q9Y6M7 1214 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 CCDC66A2RUB6 948 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 TMEM191CA6NGB0 347 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 URI1O94763 535 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 SOD2P04179 222 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 ACAT1P24752 427 aaKnown RBP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 ADORA2BP29275 332 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 MAGEA11P43364 429 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 NT5DC3Q86UY8 548 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 SPATA2LQ8IUW3 424 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 FIBCD1Q8N539 461 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 PIK3R5Q8WYR1 880 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 PBKQ96KB5 322 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 RPGRIP1Q96KN7 1286 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 B3GNT5Q9BYG0 378 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 HSFX1Q9UBD0 423 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 CYTH4Q9UIA0 394 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 ALG6Q9Y672 507 aa20.05■□□□□ 0.8
TSPAN4-204ENST00000397404 MYBPHLA2RUH7 354 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 I3L4J1 428 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 AP1G2O75843 785 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 PROSCO94903 275 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 ERBB2P04626 1255 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 SLC6A3Q01959 620 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 KRT17Q04695 432 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 CTXN3Q4LDR2 81 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 EFHC1Q5JVL4 640 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 PMF1Q6P1K2 205 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 CLEC20AQ6ZU45 233 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 DDX53Q86TM3 631 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 SLC39A11Q8N1S5 342 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 SPPL2BQ8TCT7 592 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 CLP1Q92989 425 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms