RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TSPY1Q01534 308 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 BFSP1Q12934 665 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 PDGFRLQ15198 375 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 SF3A2Q15428 464 aaKnown RBP9.43□□□□□ -0.9
CAPN3-208ENST00000397204 SV2CQ496J9 727 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 STPG1Q5TH74 334 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 WSCD1Q658N2 575 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 FSTL4Q6MZW2 842 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 ZNF720Q7Z2F6 126 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 TMEM150AQ86TG1 271 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 KBTBD6Q86V97 674 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 CCDC26Q8TAB7 109 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 BAP1Q92560 729 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 USP13Q92995 863 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-208ENST00000397204 FIZ1Q96SL8 496 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 SMG9Q9H0W8 520 aaKnown RBP9.43□□□□□ -0.9
CAPN3-208ENST00000397204 ZHX3Q9H4I2 956 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 HPS4Q9NQG7 708 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 VPS45Q9NRW7 570 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 BLOC1S4Q9NUP1 217 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 UXTQ9UBK9 157 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-208ENST00000397204 ATRXP46100 2492 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 ZZEF1O43149 2961 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 OTOL1A6NHN0 477 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 TBCAO75347 108 aaKnown RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 PMLP29590 882 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 NMT1P30419 496 aaKnown RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 HOXC13P31276 330 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 PXNP49023 591 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 SH3BP2P78314 561 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 NR1H3Q13133 447 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 MCM6Q14566 821 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 PLK5Q496M5 336 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 ZC2HC1CQ53FD0 456 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 N4BP2L1Q5TBK1 243 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 TXNDC8Q6A555 127 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 PKN3Q6P5Z2 889 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 CRELD2Q6UXH1 353 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 SYT13Q7L8C5 426 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 CACTINQ8WUQ7 758 aaKnown RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 RAD54LQ92698 747 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 HVCN1Q96D96 273 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 MYRFLQ96LU7 910 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 P2RY13Q9BPV8 354 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 ACBD6Q9BR61 282 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 LSM14BQ9BX40 385 aaKnown RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 EBF3Q9H4W6 596 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 FBRSL1Q9HCM7 1045 aaKnown RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 ABCB6Q9NP58 842 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 ABI2Q9NYB9 513 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-208ENST00000397204 EBF1Q9UH73 591 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 CCL26Q9Y258 94 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 FAM208BQ5VWN6 2430 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 COL4A2P08572 1712 aa9.42□□□□□ -0.9
CAPN3-208ENST00000397204 RALGAPA1Q6GYQ0 2036 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 TTC24A2A3L6 582 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-208ENST00000397204 HUS1O60921 280 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 RHOBTB1O94844 696 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 LDHAP00338 332 aaKnown RBP9.41□□□□□ -0.9
CAPN3-208ENST00000397204 EGFP01133 1207 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 USP17L7P0C7H9 530 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 ARSAP15289 507 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 PLCG1P19174 1290 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 ADSSP30520 456 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 GJA4P35212 333 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 CDR1P51861 262 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 FAM160A1Q05DH4 1040 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 KARSQ15046 597 aaKnown RBP9.41□□□□□ -0.9
CAPN3-208ENST00000397204 ELF2Q15723 593 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 TRIM68Q6AZZ1 485 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 TMEM86AQ8N2M4 240 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 CPA6Q8N4T0 437 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 RASSF8Q8NHQ8 419 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 SPATA18Q8TC71 538 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 LRRC15Q8TF66 581 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 LEO1Q8WVC0 666 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-208ENST00000397204 POMGNT1Q8WZA1 660 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 LARP4BQ92615 738 aaKnown RBP9.41□□□□□ -0.9
CAPN3-208ENST00000397204 CHFRQ96EP1 664 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 TRMT2BQ96GJ1 504 aaKnown RBP9.41□□□□□ -0.9
CAPN3-208ENST00000397204 ZNF560Q96MR9 790 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 PI4K2AQ9BTU6 479 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 TMEM206Q9H813 350 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 ECT2Q9H8V3 914 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 RXFP3Q9NSD7 469 aa9.41□□□□□ -0.9
CAPN3-208ENST00000397204 MAGED2Q9UNF1 606 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-208ENST00000397204 TISP43B9A030 160 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 NOL4O94818 638 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 KCNK5O95279 499 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 APBB3O95704 486 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 GJB2P29033 226 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 MPLP40238 635 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 LHX1P48742 406 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 MYL7Q01449 175 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 MTF1Q14872 753 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 RABEP1Q15276 862 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 CCDC6Q16204 474 aa9.4□□□□□ -0.9
CAPN3-208ENST00000397204 DDR2Q16832 855 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms