RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 NANOGNBQ7Z5D8 188 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 NOP9Q86U38 636 aaKnown RBP10.35□□□□□ -0.75
APTX-207ENST00000397172 CHSY1Q86X52 802 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 SLC15A3Q8IY34 581 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 PPP1R14CQ8TAE6 165 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 BORCS5Q969J3 196 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 PNMA5Q96PV4 448 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 CYTH2Q99418 400 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 FAM96AQ9H5X1 160 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 KIAA1586Q9HCI6 787 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 UBAP1Q9NZ09 502 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 EXOC7Q9UPT5 735 aa10.35□□□□□ -0.75
APTX-207ENST00000397172 FAM32AQ9Y421 112 aaKnown RBP10.35□□□□□ -0.75
APTX-207ENST00000397172 GPC6Q9Y625 555 aaPredicted RBP10.35□□□□□ -0.75
APTX-207ENST00000397172 CYP2D7A0A087X1C5 515 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 ESYT2A0FGR8 921 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 RSPH10B2B2RC85 870 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 FCHO1O14526 889 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 KRT38O76015 456 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 RSPH10BP0C881 870 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 PLS3P13797 630 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 COMTP21964 271 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 SHMT1P34896 483 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 CHKAP35790 457 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 CAP2P40123 477 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 CDK8P49336 464 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 NCKAP1LP55160 1127 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 ARPC4P59998 168 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 RELAQ04206 551 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 TBL3Q12788 808 aaKnown RBP10.34□□□□□ -0.75
APTX-207ENST00000397172 KNOP1Q1ED39 458 aaKnown RBP10.34□□□□□ -0.75
APTX-207ENST00000397172 DEFB115Q30KQ5 88 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 NADK2Q4G0N4 442 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 RARS2Q5T160 578 aaKnown RBP10.34□□□□□ -0.75
APTX-207ENST00000397172 ATG16L1Q676U5 607 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 RGMBQ6NW40 437 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 MOB2Q70IA6 237 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 DDHD1Q8NEL9 900 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 RASGRP4Q8TDF6 673 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 GPKOWQ92917 476 aaPredicted RBP eCLIP10.34□□□□□ -0.759e-6■■□□□ 14.5
APTX-207ENST00000397172 BHMTQ93088 406 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 EFHD2Q96C19 240 aaPredicted RBP10.34□□□□□ -0.75
APTX-207ENST00000397172 CCDC17Q96LX7 622 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 PANX3Q96QZ0 392 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 THTPAQ9BU02 230 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 MRPL1Q9BYD6 325 aaKnown RBP10.34□□□□□ -0.75
APTX-207ENST00000397172 THAP2Q9H0W7 228 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 RRN3Q9NYV6 651 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 SOX13Q9UN79 622 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 FZD1Q9UP38 647 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 DTNAQ9Y4J8 743 aa10.34□□□□□ -0.75
APTX-207ENST00000397172 KLF11O14901 512 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 TYROBPO43914 113 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 SERPINB7O75635 380 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 ALDH2P05091 517 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 ASNSP08243 561 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 FAM58BPP0C7Q3 252 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 CDK9P50750 372 aaKnown RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 VGLL4Q14135 290 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 HYIQ5T013 277 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 RAPH1Q70E73 1250 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 REXO1Q8N1G1 1221 aaKnown RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 GIPC3Q8TF64 312 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 SREK1Q8WXA9 508 aaKnown RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 DNAJC19Q96DA6 116 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 SLC10A4Q96EP9 437 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 DYNLL2Q96FJ2 89 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 DNAJC1Q96KC8 554 aaKnown RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 MTMR9Q96QG7 549 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 RBM15Q96T37 977 aaKnown RBP eCLIP10.33□□□□□ -0.76
APTX-207ENST00000397172 AGPAT1Q99943 283 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 UNKQ9C0B0 810 aaKnown RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 DRC3Q9H069 523 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 RBM38Q9H0Z9 239 aaKnown RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 MKNK2Q9HBH9 465 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 EPS15L1Q9UBC2 864 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 EFR3BQ9Y2G0 817 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
APTX-207ENST00000397172 LAMB1P07942 1786 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 MYPNQ86TC9 1320 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 SMCO2A6NFE2 343 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 ANKRD63C9JTQ0 380 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 POC1B-GALNT4F8VUJ3 575 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 ZNF701M0R085 212 aaPredicted RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 PIK3CDO00329 1044 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 FBP2O00757 339 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 KLHL2O95198 593 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 PGM3O95394 542 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 TFAP2AP05549 437 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 OCM2P0CE71 109 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 OCMP0CE72 109 aaPredicted RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 TSHRP16473 764 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 ACAT1P24752 427 aaKnown RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 FDFT1P37268 417 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 GRIA2P42262 883 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 ECE1P42892 770 aa10.33□□□□□ -0.76
APTX-207ENST00000397172 ZNF157P51786 506 aaPredicted RBP10.33□□□□□ -0.76
APTX-207ENST00000397172 ESRRGP62508 458 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms