RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 TAF2Q6P1X5 1199 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 WDR93Q6P2C0 686 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 LMO3Q8TAP4 145 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 MORC4Q8TE76 937 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 TWNKQ96RR1 684 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 KRT82Q9NSB4 513 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 INTS9Q9NV88 658 aaKnown RBP15.95■□□□□ 0.14
MCF2L-205ENST00000397017 PRDM4Q9UKN5 801 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 GOLGA8RI6L899 631 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 HSD17B3P37058 310 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 DHX34Q14147 1143 aaKnown RBP15.95■□□□□ 0.14
MCF2L-205ENST00000397017 TAF5Q15542 800 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 BHMTQ93088 406 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 RNF208Q9H0X6 261 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 ITGA11Q9UKX5 1188 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 USP18Q9UMW8 372 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 COMMD10Q9Y6G5 202 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 FAM187AA6NFU0 413 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 HOXC6P09630 235 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 FAM200BP0CF97 657 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 OTUD4Q01804 1114 aaKnown RBP15.95■□□□□ 0.14
MCF2L-205ENST00000397017 NOGQ13253 232 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 TAOK1Q7L7X3 1001 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 RASAL3Q86YV0 1011 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 SMC1BQ8NDV3 1235 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 CALR3Q96L12 384 aaKnown RBP15.95■□□□□ 0.14
MCF2L-205ENST00000397017 RBM15Q96T37 977 aaKnown RBP eCLIP15.95■□□□□ 0.148e-6■■■■■ 30.1
MCF2L-205ENST00000397017 SEPT5Q99719 369 aaPredicted RBP15.95■□□□□ 0.14
MCF2L-205ENST00000397017 C16orf70Q9BSU1 422 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 ELOVL4Q9GZR5 314 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 IFT122Q9HBG6 1241 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 HOMER3Q9NSC5 361 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 STAP1Q9ULZ2 295 aa15.95■□□□□ 0.14
MCF2L-205ENST00000397017 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
MCF2L-205ENST00000397017 SMIM28A0A1B0GU29 152 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 NT5C1B-RDH14C9J2C7 533 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 BNIP3LO60238 219 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 EP400NLQ6ZTU2 488 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 SPATA2LQ8IUW3 424 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-205ENST00000397017 SNF8Q96H20 258 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 RUNDC3BQ96NL0 473 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 TSPYL2Q9H2G4 693 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-205ENST00000397017 KLHL8Q9P2G9 620 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-205ENST00000397017 WDR35Q9P2L0 1181 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 IPPQ9Y573 584 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 CEP290O15078 2479 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 LCA5LO95447 670 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 BRCC3P46736 316 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 ITIH3Q06033 890 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 GRB14Q14449 540 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 SLMAPQ14BN4 828 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 URGCPQ8TCY9 931 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 CABS1Q96KC9 395 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 SEMA4AQ9H3S1 761 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 DDIT4Q9NX09 232 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 MIPP30301 263 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 ZBTB16Q05516 673 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 DEUP1Q05D60 604 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
MCF2L-205ENST00000397017 MMRN1Q13201 1228 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 RAPGEF5Q92565 580 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 SENP8Q96LD8 212 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 FBXL18Q96ME1 805 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 KLF6Q99612 283 aaPredicted RBP15.94■□□□□ 0.14
MCF2L-205ENST00000397017 SAMD15Q9P1V8 674 aa15.94■□□□□ 0.14
MCF2L-205ENST00000397017 ROR1Q01973 937 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 MGAT5BQ3V5L5 792 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 PCSK9Q8NBP7 692 aaKnown RBP15.93■□□□□ 0.14
MCF2L-205ENST00000397017 ZBED2Q9BTP6 218 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 FLRT1Q9NZU1 646 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 DNPEPQ9ULA0 475 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 PCDHA3Q9Y5H8 950 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 STBD1O95210 358 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 SESN2P58004 480 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-205ENST00000397017 C11orf63Q6NUN7 778 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 PRELID2Q8N945 189 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 LRRC57Q8N9N7 239 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 DPEP3Q9H4B8 488 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 MYADML2A6NDP7 307 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 SOCS7O14512 581 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 SCAMP3O14828 347 aaKnown RBP15.93■□□□□ 0.14
MCF2L-205ENST00000397017 CPP00450 1065 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 ARL1P40616 181 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-205ENST00000397017 RPL21P46778 160 aaKnown RBP15.93■□□□□ 0.14
MCF2L-205ENST00000397017 BTBD8Q5XKL5 378 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 CENPUQ71F23 418 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 MIB1Q86YT6 1006 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 MDM1Q8TC05 714 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 MICAL1Q8TDZ2 1067 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 HES6Q96HZ4 224 aa15.93■□□□□ 0.14
MCF2L-205ENST00000397017 SENP6Q9GZR1 1112 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-205ENST00000397017 SPAG7O75391 227 aa15.92■□□□□ 0.14
MCF2L-205ENST00000397017 LGR5O75473 907 aa15.92■□□□□ 0.14
MCF2L-205ENST00000397017 SDHAF4Q5VUM1 108 aa15.92■□□□□ 0.14
MCF2L-205ENST00000397017 MICALL1Q8N3F8 863 aa15.92■□□□□ 0.14
MCF2L-205ENST00000397017 BBOF1Q8ND07 529 aa15.92■□□□□ 0.14
MCF2L-205ENST00000397017 SH3TC2Q8TF17 1288 aa15.92■□□□□ 0.14
MCF2L-205ENST00000397017 HMX1Q9NP08 348 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-205ENST00000397017 SLC38A7Q9NVC3 462 aa15.92■□□□□ 0.14
MCF2L-205ENST00000397017 RAB21Q9UL25 225 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms