RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 HDAC7Q8WUI4 952 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 SLC20A1Q8WUM9 679 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 AGPAT1Q99943 283 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 RTP3Q9BQQ7 232 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 VN1R3Q9BXE9 311 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 TSPYL1Q9H0U9 437 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 STIM2Q9P246 746 aa15.7■□□□□ 0.1
TM9SF1-202ENST00000396854 LINC01553A4QN01 128 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 GOLGA6BA6NDN3 693 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 HCRTO43612 131 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 VDRP11473 427 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 PCSK1P29120 753 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 ORC1Q13415 861 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 MRPL58Q14197 206 aaKnown RBP15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 VARS2Q5ST30 1063 aaKnown RBP15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 EMBQ6PCB8 327 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 ACOT1Q86TX2 421 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 ZNF606Q8WXB4 792 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 GDAP1L1Q96MZ0 367 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 ZSWIM1Q9BR11 485 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 ACBD6Q9BR61 282 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 DPEP3Q9H4B8 488 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 STK39Q9UEW8 545 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 CDH9Q9ULB4 789 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 PCDHA11Q9Y5I1 949 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 GRXCR1A8MXD5 290 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 THAP12O43422 761 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 BUB1O43683 1085 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 CALCAP01258 141 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 SOD2P04179 222 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 PDGFRBP09619 1106 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 CHRNB2P17787 502 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 BRD2P25440 801 aaKnown RBP15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 CXCR5P32302 372 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 FMO1Q01740 532 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 PLCB3Q01970 1234 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 CFAP221Q4G0U5 840 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 DDX53Q86TM3 631 aaKnown RBP15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 THEM5Q8N1Q8 247 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 B3GALNT2Q8NCR0 500 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 TFAP2BQ92481 460 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 TTPALQ9BTX7 342 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 HERC2P3Q9BVR0 1158 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 CHST7Q9NS84 486 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 ADAMTS1Q9UHI8 967 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 PCDHGC3Q9UN70 934 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 PCDHGC5Q9Y5F6 944 aa15.69■□□□□ 0.1
TM9SF1-202ENST00000396854 LAMA2P24043 3122 aaKnown RBP15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 MMEP08473 750 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 CD19P15391 556 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 USP41Q3LFD5 358 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 SGO2Q562F6 1265 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 RTP2Q5QGT7 225 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 KIAA0319Q5VV43 1072 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 ARHGAP17Q68EM7 881 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 LRRC31Q6UY01 552 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 SND1Q7KZF4 910 aaKnown RBP eCLIP15.68■□□□□ 0.13e-9■■■■■ 32.4
TM9SF1-202ENST00000396854 SLC30A5Q8TAD4 765 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 LNX1Q8TBB1 728 aaPredicted RBP15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 RIN2Q8WYP3 895 aaPredicted RBP15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 CAVIN3Q969G5 261 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 HEXIM2Q96MH2 286 aaKnown RBP15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 PSMB7Q99436 277 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 SYT15Q9BQS2 421 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 PLVAPQ9BX97 442 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 SMARCAL1Q9NZC9 954 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 EHD2Q9NZN4 543 aa15.68■□□□□ 0.1
TM9SF1-202ENST00000396854 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 GRID2IPA4D2P6 1211 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 BTNL10A8MVZ5 291 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 DDX3XO00571 662 aaKnown RBP eCLIP15.67■□□□□ 0.13e-16■■■■■ 40.5
TM9SF1-202ENST00000396854 MED7O43513 233 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 FGF18O76093 207 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 MYOGP15173 224 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 ACAT1P24752 427 aaKnown RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 BMPR1AP36894 532 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 NNTQ13423 1086 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 STILQ15468 1287 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 INTS6LQ5JSJ4 861 aaKnown RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 ZNF280DQ6N043 979 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 C8orf74Q6P047 294 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 TAS1R1Q7RTX1 841 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 OR10T2Q8NGX3 314 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 SH3GL2Q99962 352 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 OXCT2Q9BYC2 517 aaPredicted RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 CRTAC1Q9NQ79 661 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 RBM12Q9NTZ6 932 aaKnown RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 NAGPAQ9UK23 515 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 C5orf67F2Z3F1 127 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 O00370 1275 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 SHOX2O60902 331 aaPredicted RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 PTPN1P18031 435 aaKnown RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 TNFAIP3P21580 790 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 PSMC1P62191 440 aaKnown RBP15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 CNGA2Q16280 664 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 PDE4DIPQ5VU43 2346 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 TRIM72Q6ZMU5 477 aa15.67■□□□□ 0.1
TM9SF1-202ENST00000396854 ANKS3Q6ZW76 656 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms