RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 RAD21L1Q9H4I0 556 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 PCDHB2Q9Y5E7 798 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 KAT6AQ92794 2004 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 GLRA3O75311 464 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 GRAP2O75791 330 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 BCL10O95999 233 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 CD4P01730 458 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 GUCA1AP43080 201 aaPredicted RBP14.49□□□□□ -0.09
COL4A3-202ENST00000396578 PHKG1Q16816 387 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 SEL1L3Q68CR1 1132 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 JADE3Q92613 823 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 ZNF669Q96BR6 464 aaPredicted RBP14.49□□□□□ -0.09
COL4A3-202ENST00000396578 SYNDIG1Q9H7V2 258 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 CPDO75976 1380 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 FDX1P10109 184 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 ARMC3Q5W041 872 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 LPCAT2Q7L5N7 544 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 TMEM79Q9BSE2 394 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 EFCAB6Q5THR3 1501 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 PSTPIP1O43586 416 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 FLT3P36888 993 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 DDR2Q16832 855 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 KIF28PB7ZC32 967 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 ATP6V1B2P21281 511 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 MAGEA10P43363 369 aaPredicted RBP14.49□□□□□ -0.09
COL4A3-202ENST00000396578 KLHL17Q6TDP4 642 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 TMEM8AQ9HCN3 771 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL4A3-202ENST00000396578 SNX9Q9Y5X1 595 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 TRIM49D1C9J1S8 452 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 F5H6K3 240 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 CST8O60676 142 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 FMR1Q06787 632 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL4A3-202ENST00000396578 KLRC3Q07444 240 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 ALFQ53S48 1182 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 SGMS1Q86VZ5 419 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 APOBEC3FQ8IUX4 373 aaKnown RBP14.49□□□□□ -0.09
COL4A3-202ENST00000396578 MASTLQ96GX5 879 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 FAM118BQ9BPY3 351 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 REEP2Q9BRK0 252 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 GTF2A1LQ9UNN4 478 aa14.49□□□□□ -0.09
COL4A3-202ENST00000396578 MAPK1P28482 360 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 PURAQ00577 322 aaKnown RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 RSBN1Q5VWQ0 802 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 DENND1BQ6P3S1 775 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 SH3BP5LQ7L8J4 393 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 SYN2Q92777 582 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 DPF2Q92785 391 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 REXO4Q9GZR2 422 aaKnown RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 KCTD10Q9H3F6 313 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 KLHL3Q9UH77 587 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 DGAT1O75907 488 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 ANXA9O76027 345 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 RHOBTB3O94955 611 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FYNP06241 537 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 AVPR1AP37288 418 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 SLC44A5Q8NCS7 719 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FRMD8P1Q9BZ68 369 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 KRT6BP04259 564 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 GSTM1P09488 218 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 KRT6CP48668 564 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FEZF2Q8TBJ5 459 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 GPR101Q96P66 508 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 SHCBP1LQ9BZQ2 653 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 WHRNQ9P202 907 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 PNMA8BQ9ULN7 279 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 ALDH1A2O94788 518 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 PDGFRBP09619 1106 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 EPB42P16452 691 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 ITGAXP20702 1163 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 PIK3R1P27986 724 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 SNRPFP62306 86 aaKnown RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 RNFT2Q96EX2 444 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 AVENQ9NQS1 362 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 DAPK2Q9UIK4 370 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 KLHL20Q9Y2M5 609 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FAM25AB3EWG3 89 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FAM25CB3EWG5 89 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FAM25GB3EWG6 89 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 ATP12AP54707 1039 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 CDC16Q13042 620 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 EIF2B5Q13144 721 aaKnown RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 SUSD4Q5VX71 490 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 USP13Q92995 863 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 CATSPER2Q96P56 530 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 PABPC3Q9H361 631 aaKnown RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 C2orf81A6NN90 581 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FEN1P39748 380 aaKnown RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 FXR1P51114 621 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 MFSD14CQ5VZR4 134 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 LRRC34Q8IZ02 419 aa14.48□□□□□ -0.09
COL4A3-202ENST00000396578 RUVBL2Q9Y230 463 aaKnown RBP14.48□□□□□ -0.09
COL4A3-202ENST00000396578 TMEM2Q9UHN6 1383 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 O00370 1275 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 FKBP6O75344 327 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 DARSP14868 501 aaKnown RBP14.47□□□□□ -0.09
COL4A3-202ENST00000396578 PRDX5P30044 214 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 LRRC6Q86X45 466 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 LRRC71Q8N4P6 559 aa14.47□□□□□ -0.09
COL4A3-202ENST00000396578 RDM1Q8NG50 284 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms