RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TTC7AQ9ULT0 858 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 UQCRHLA0A096LP55 91 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 ABHD14A-ACY1A0A1B0GW23 586 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 CLDN5O00501 218 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 UQCRHP07919 91 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 CSF2RAP15509 400 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 SLC1A1P43005 524 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 MARCKSL1P49006 195 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 SLC11A1P49279 550 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 ITIH3Q06033 890 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 MDH1BQ5I0G3 518 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 TRNP1Q6NT89 227 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 FAM183BPQ6ZVS7 135 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 PIWIL1Q96J94 861 aaKnown RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 MS4A14Q96JA4 679 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 PBKQ96KB5 322 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 PSMB7Q99436 277 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 EHD2Q9NZN4 543 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 EFCAB8A8MWE9 144 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 MIF4GDA9UHW6 222 aaKnown RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 XPO1O14980 1071 aaKnown RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 ADORA2BP29275 332 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 NAA30Q147X3 362 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 INTS6LQ5JSJ4 861 aaKnown RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 DNAJC24Q6P3W2 148 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 C16orf59Q7L2K0 433 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 LRRTM3Q86VH5 581 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 JOSD2Q8TAC2 188 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 ACTRT1Q8TDG2 376 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 FNIP1Q8TF40 1166 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 BCL7CQ8WUZ0 217 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 PCED1BQ96HM7 432 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 MRPL9Q9BYD2 267 aaKnown RBP13.42□□□□□ -0.26
TRIM39-204ENST00000396548 CSNK1G1Q9HCP0 422 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 TMLHEQ9NVH6 421 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 RNF14Q9UBS8 474 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 LCMT1Q9UIC8 334 aa13.42□□□□□ -0.26
TRIM39-204ENST00000396548 RFC1P35251 1148 aaPredicted RBP13.41□□□□□ -0.26
TRIM39-204ENST00000396548 OR1G1P47890 313 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 CACNA2D1P54289 1103 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 CLEC20AQ6ZU45 233 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 ARFGAP1Q8N6T3 406 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 CAPZA3Q96KX2 299 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 MCEEQ96PE7 176 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM209Q96SK2 561 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 DNAI2Q9GZS0 605 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 HHLA1C9JL84 531 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 KCNK3O14649 394 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 PAPSS1O43252 624 aaPredicted RBP13.41□□□□□ -0.26
TRIM39-204ENST00000396548 GALTP07902 379 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 RNASELQ05823 741 aaKnown RBP13.41□□□□□ -0.26
TRIM39-204ENST00000396548 RNF168Q8IYW5 571 aaPredicted RBP13.41□□□□□ -0.26
TRIM39-204ENST00000396548 ZMIZ2Q8NF64 920 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 UBXN6Q9BZV1 441 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 SMARCAL1Q9NZC9 954 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 HESX1Q9UBX0 185 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 IP6K2Q9UHH9 426 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 ADAM28Q9UKQ2 775 aa13.41□□□□□ -0.26
TRIM39-204ENST00000396548 TBKBP1A7MCY6 615 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM110-MUSTN1A8MSY1 372 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 MYO1FO00160 1098 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 FGFR3P22607 806 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 PCSK1P29120 753 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 RAB41Q5JT25 222 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 MSANTD4Q8NCY6 345 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 HSFY1Q96LI6 401 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 SMOQ99835 787 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 CARD9Q9H257 536 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 SYN3O14994 580 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 TBC1D4O60343 1298 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 KRT3P12035 628 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 NPR3P17342 541 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 SCNN1AP37088 669 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 RGS7P49802 495 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 WDR5P61964 334 aaKnown RBP13.4□□□□□ -0.26
TRIM39-204ENST00000396548 DAB2IPQ5VWQ8 1189 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 ARCQ7LC44 396 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 FAM35AQ86V20 835 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 TMEM173Q86WV6 379 aaPredicted RBP13.4□□□□□ -0.26
TRIM39-204ENST00000396548 METTL23Q86XA0 190 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 ZDHHC17Q8IUH5 632 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 LRRC43Q8N309 656 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 GPR62Q9BZJ7 368 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 METTL5Q9NRN9 209 aaKnown RBP13.4□□□□□ -0.26
TRIM39-204ENST00000396548 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 TAS2R40P59535 323 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 DEFB103AP81534 67 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 FAM193BQ96PV7 902 aaPredicted RBP13.4□□□□□ -0.26
TRIM39-204ENST00000396548 ZCWPW1Q9H0M4 648 aa13.4□□□□□ -0.26
TRIM39-204ENST00000396548 C2CD4BA6NLJ0 364 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 ALDH2P05091 517 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 SLC6A3Q01959 620 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
TRIM39-204ENST00000396548 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 TMEM199Q8N511 208 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms