RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 OLFML2BQ68BL8 750 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 RAPH1Q70E73 1250 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 CPXCR1Q8N123 301 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 PPM1NQ8N819 430 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ZC3H15Q8WU90 426 aaKnown RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ZFAND2BQ8WV99 257 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 VTI1AQ96AJ9 217 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 MCEEQ96PE7 176 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 PANX3Q96QZ0 392 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ECSITQ9BQ95 431 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 VCX3BQ9H321 246 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 TLE6Q9H808 572 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 KCNK13Q9HB14 408 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 TMEM8AQ9HCN3 771 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 VCX3AQ9NNX9 186 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ZNF277Q9NRM2 450 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 FBXO28Q9NVF7 368 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ZNF212Q9UDV6 495 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 SPECC1L-ADORA2AF8WAN1 911 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 P4HA2O15460 535 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 MYCLP12524 364 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 UNGP13051 313 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 SERPINB6P35237 376 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 HIRAP54198 1017 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 AP2B1P63010 937 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 LMNB2Q03252 620 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 TCEAL1Q15170 157 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 APOBEC3HQ6NTF7 200 aaKnown RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 ACER1Q8TDN7 264 aa10.3□□□□□ -0.76
TRIM39-203ENST00000396547 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-203ENST00000396547 MAP3K6O95382 1288 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 RARBP10826 455 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 RARRES1P49788 294 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 AQP5P55064 265 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 PSMC5P62195 406 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 BMPR2Q13873 1038 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 LIN52Q52LA3 116 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 CYP4A22Q5TCH4 519 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 ATP11CQ8NB49 1132 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 PPP1R14CQ8TAE6 165 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 ABTB1Q969K4 478 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-203ENST00000396547 OPTNQ96CV9 577 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 IFT43Q96FT9 208 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 CENPKQ9BS16 269 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 TUBB6Q9BUF5 446 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 SPATA16Q9BXB7 569 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 PREBQ9HCU5 417 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 LMCD1Q9NZU5 365 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 PCSK1NQ9UHG2 260 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 SLC24A2Q9UI40 661 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 ATAD5Q96QE3 1844 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 UMODL1Q5DID0 1318 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 MYPNQ86TC9 1320 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 LOC100653049A0A140TA62 436 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 YDJCA8MPS7 323 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 I3L4J1 428 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 COPEO14579 308 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 HNRNPRO43390 633 aaKnown RBP10.29□□□□□ -0.76
TRIM39-203ENST00000396547 PFDN1O60925 122 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 KRT34O76011 436 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 GNA15P30679 374 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 ASPHQ12797 758 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 GRAMD1BQ3KR37 738 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 RNASEH2BQ5TBB1 312 aaKnown RBP10.29□□□□□ -0.76
TRIM39-203ENST00000396547 ULK2Q8IYT8 1036 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 ALLCQ8N6M5 410 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 FAM71DQ8N9W8 422 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 EXD1Q8NHP7 514 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 TIPINQ9BVW5 301 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 MRIQ9BWK5 157 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 DMAP1Q9NPF5 467 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-203ENST00000396547 DDX18Q9NVP1 670 aaKnown RBP10.29□□□□□ -0.76
TRIM39-203ENST00000396547 NYAP2Q9P242 653 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 XPO7Q9UIA9 1087 aaKnown RBP10.29□□□□□ -0.76
TRIM39-203ENST00000396547 UBE4BO95155 1302 aa10.29□□□□□ -0.76
TRIM39-203ENST00000396547 PLIN4Q96Q06 1357 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 PRR5-ARHGAP8B1AHC4 643 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 DLDP09622 509 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 YWHABP31946 246 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 CRKP46108 304 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 STAT2P52630 851 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ARHGAP8P85298 464 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 BTKQ06187 659 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 CDC16Q13042 620 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 PEX6Q13608 980 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 MORF4L2Q15014 288 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 CHI3L2Q15782 390 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 KBTBD12Q3ZCT8 623 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 FAXCQ5TGI0 409 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 CEP128Q6ZU80 1094 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 SATL1Q86VE3 508 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 IGDCC3Q8IVU1 814 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ST13P4Q8IZP2 240 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 BANPQ8N9N5 519 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ACTL9Q8TC94 416 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 HIC2Q96JB3 615 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms