RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 LHX5Q9H2C1 402 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 TRABDQ9H4I3 376 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 GGT7Q9UJ14 662 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 DRG1Q9Y295 367 aaKnown RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 ZBED1O96006 694 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 KDELR1P24390 212 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 MIPP30301 263 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 PSMC4P43686 418 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 OGDHQ02218 1023 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 KLF1Q13351 362 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 GLRA4Q5JXX5 417 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 TXNRD3NBQ6F5E7 133 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 MFSD5Q6N075 450 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 ACOT1Q86TX2 421 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 KIAA0319LQ8IZA0 1049 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 C4orf33Q8N1A6 199 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 RIBC1Q8N443 379 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 FERMT1Q9BQL6 677 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 PLCD4Q9BRC7 762 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 XPO7Q9UIA9 1087 aaKnown RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 COL11A1P12107 1806 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 ERBB2P04626 1255 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 ADORA2BP29275 332 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 SPARCL1Q14515 664 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 STILQ15468 1287 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 HIBCHQ6NVY1 386 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 YTHDF3Q7Z739 585 aaKnown RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 SETD4Q9NVD3 440 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM47DPA6NHR8 397 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 MTHFD1LQ6UB35 978 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 POLNQ7Z5Q5 900 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 SHCBP1Q8NEM2 672 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 RXFP2Q8WXD0 754 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 PDZD7Q9H5P4 517 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 TJP2Q9UDY2 1190 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 SYNJ2BP-COX16A0A087WUM0 186 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 IGKV6-21A0A0C4DH24 114 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 CCT8L1PA6NM43 557 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 FOXO6A8MYZ6 492 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 XPOTO43592 962 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 HMGCRP04035 888 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 CDKN2BP42772 138 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 BCAR1P56945 870 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM149B1Q96BN6 582 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 THOC1Q96FV9 657 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 COX16Q9P0S2 106 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 GGA2Q9UJY4 613 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 SSC5DA1L4H1 1573 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 FER1L6Q2WGJ9 1857 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 LRCH4O75427 683 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 CCDC62Q6P9F0 684 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 CCDC63Q8NA47 563 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 FRMD8P1Q9BZ68 369 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 XYLT2Q9H1B5 865 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 SNTG2Q9NY99 539 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 IQCA1LA6NCM1 817 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 CILPO75339 1184 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 ITGAVP06756 1048 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 INHBAP08476 426 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 PDGFRBP09619 1106 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 MCCD1P59942 119 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 AMHR2Q16671 573 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 KLHL38Q2WGJ6 581 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 DCAF4L1Q3SXM0 396 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 C3orf62Q6ZUJ4 267 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 VSIG1Q86XK7 387 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 XYLT1Q86Y38 959 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 PPTC7Q8NI37 304 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 CNPY3Q9BT09 278 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 KIAA1257Q9ULG3 409 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 SHOC2Q9UQ13 582 aa12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 USP15Q9Y4E8 981 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-202ENST00000396410 E5RJQ4 531 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM47CQ5HY64 1035 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 CFAP36Q96G28 342 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 PSMC3IPQ9P2W1 217 aaPredicted RBP12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 HMGXB4Q9UGU5 601 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 PIN4Q9Y237 131 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 APOL1O14791 398 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 STRNO43815 780 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 GTF2A2P52657 109 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 ARHGAP1Q07960 439 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 WDR91A4D1P6 747 aa12.1□□□□□ -0.47
PDXDC1-202ENST00000396410 KCNN4O15554 427 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms