RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 UNGP13051 313 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 ATP2A2P16615 1042 aaKnown RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 RFX1P22670 979 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 RFC1P35251 1148 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 CTCFP49711 727 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 RGS7P49802 495 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 OTUD4Q01804 1114 aaKnown RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 LACTB2Q53H82 288 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 MAP1SQ66K74 1059 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 NAIF1Q69YI7 327 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 RFWD3Q6PCD5 774 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 TTC7BQ86TV6 843 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 FMNL3Q8IVF7 1028 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 MCPH1Q8NEM0 835 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 TMC2Q8TDI7 906 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 SLC7A3Q8WY07 619 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ZNF570Q96NI8 536 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 FAM111AQ96PZ2 611 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 IWS1Q96ST2 819 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 PDGFCQ9NRA1 345 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.75□□□□□ -0.851e-6■■■■■ 28.6
NDE1-201ENST00000396354 CHKBQ9Y259 395 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 GGPS1O95749 300 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 GSCP56915 257 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 CLDN10P78369 228 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 WDR72Q3MJ13 1102 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ZACNQ401N2 412 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 PPP6R3Q5H9R7 873 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 RIOX2Q8IUF8 465 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 FBXO16Q8IX29 292 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 SLC25A41Q8N5S1 370 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ANKLE1Q8NAG6 615 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 RFWD2Q8NHY2 731 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 JOSD2Q8TAC2 188 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 AGR3Q8TD06 166 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ACSS2Q9NR19 701 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 RBPJLQ9UBG7 517 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 C15orf41Q9Y2V0 281 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 MAD1L1Q9Y6D9 718 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 STYXL1Q9Y6J8 313 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 EVPLQ92817 2033 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 A0A0G2JLL6 359 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 IQCA1LA6NCM1 817 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 EXTL3O43909 919 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ANK1P16157 1881 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 GARTP22102 1010 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 TCF7P36402 384 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 RTP1P59025 263 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 NOMO3P69849 1222 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 PTK6Q13882 451 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 SPARCL1Q14515 664 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 HIF1AQ16665 826 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 GNPTABQ3T906 1256 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ANKRD20A2Q5SQ80 823 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 FNBP1LQ5T0N5 605 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ANKRD20A1Q5TYW2 823 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 ANKRD20A3Q5VUR7 823 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 USP50Q70EL3 339 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 PRRT2Q7Z6L0 340 aaPredicted RBP9.75□□□□□ -0.85
NDE1-201ENST00000396354 FBXO36Q8NEA4 188 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 FEZF2Q8TBJ5 459 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 TCP10LQ8TDR4 215 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 CEP41Q9BYV8 373 aa9.75□□□□□ -0.85
NDE1-201ENST00000396354 STAM2O75886 525 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 GMPRP36959 345 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 HADHBP55084 474 aaKnown RBP9.74□□□□□ -0.85
NDE1-201ENST00000396354 SNRPFP62306 86 aaKnown RBP9.74□□□□□ -0.85
NDE1-201ENST00000396354 MXRA7P84157 204 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 PPP2R5DQ14738 602 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 MAPK6Q16659 721 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 ZCCHC23Q6ZST2 131 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 PPM1NQ8N819 430 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 RNF149Q8NC42 400 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 KCTD6Q8NC69 237 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 PRPF31Q8WWY3 499 aaKnown RBP9.74□□□□□ -0.85
NDE1-201ENST00000396354 TFAP2BQ92481 460 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 CENPTQ96BT3 561 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 MIEF2Q96C03 454 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 ATXN7L3BQ96GX2 97 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 CFAP57Q96MR6 1250 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 PGLYRP2Q96PD5 576 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 RXFP1Q9HBX9 757 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 IL1RAPL1Q9NZN1 696 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 ZFP69BQ9UJL9 534 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 SCN4AP35499 1836 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 A0A0B4J269 797 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 H7C0C1 242 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 ABLIM1O14639 778 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 IQCF3P0C7M6 154 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 ATP5OP48047 213 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 PSMC1P62191 440 aaKnown RBP9.74□□□□□ -0.85
NDE1-201ENST00000396354 KDSRQ06136 332 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 BNIP1Q12981 228 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 PSMD6Q15008 389 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 AMHR2Q16671 573 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 MON1BQ7L1V2 547 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 TMEM192Q8IY95 271 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 ABRAQ8N0Z2 381 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 CHST13Q8NET6 341 aa9.74□□□□□ -0.85
NDE1-201ENST00000396354 DNERQ8NFT8 737 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms