RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DENND5BQ6ZUT9 1274 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 UNC13DQ70J99 1090 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 TRAPPC11Q7Z392 1133 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 NELFCDQ8IXH7 590 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 STKLD1Q8NE28 680 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 OSCP1Q8WVF1 389 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 CD101Q93033 1021 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 SYAP1Q96A49 352 aaPredicted RBP17.49■□□□□ 0.39
DDR1-229ENST00000396342 SPATA17Q96L03 361 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 SLITRK1Q96PX8 696 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 C7orf25Q9BPX7 421 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 AGPAT3Q9NRZ7 376 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 SEMA4GQ9NTN9 838 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 CCL26Q9Y258 94 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 CACNA1IQ9P0X4 2223 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 A0A087X0B3 334 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
DDR1-229ENST00000396342 KIF20AO95235 890 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 BDNFP23560 247 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 ATICP31939 592 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 PSMC1P62191 440 aaKnown RBP17.48■□□□□ 0.39
DDR1-229ENST00000396342 PSMD6Q15008 389 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 ELF2Q15723 593 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 CSRP2Q16527 193 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 FOXD4L5Q5VV16 416 aaPredicted RBP17.48■□□□□ 0.39
DDR1-229ENST00000396342 TRIM68Q6AZZ1 485 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 DDX42Q86XP3 938 aaKnown RBP eCLIP17.48■□□□□ 0.39
DDR1-229ENST00000396342 ZSWIM2Q8NEG5 633 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 MYCBPAPQ8TBZ2 947 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 SH3RF2Q8TEC5 729 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 FOXD4L4Q8WXT5 416 aaPredicted RBP17.48■□□□□ 0.39
DDR1-229ENST00000396342 MYLPFQ96A32 169 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 LOXL4Q96JB6 756 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 CGRRF1Q99675 332 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 ELOVL4Q9GZR5 314 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 ECT2Q9H8V3 914 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 SIX4Q9UIU6 781 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 F5P12259 2224 aa17.48■□□□□ 0.39
DDR1-229ENST00000396342 SPTBN4Q9H254 2564 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.47■□□□□ 0.39
DDR1-229ENST00000396342 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.47■□□□□ 0.39
DDR1-229ENST00000396342 PVALEFA0A1B0GWK0 134 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 A8MXQ7 604 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 K7ESF4 209 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 HRO43593 1189 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 RNF40O75150 1001 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 AKAP3O75969 853 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 ARSAP15289 507 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 GAS6Q14393 721 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 FOXD4L6Q3SYB3 417 aaPredicted RBP17.47■□□□□ 0.39
DDR1-229ENST00000396342 AASDHQ4L235 1098 aaPredicted RBP17.47■□□□□ 0.39
DDR1-229ENST00000396342 MDH1BQ5I0G3 518 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 CNNM4Q6P4Q7 775 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 FAM171BQ6P995 826 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 FOXD4L3Q6VB84 417 aaPredicted RBP17.47■□□□□ 0.39
DDR1-229ENST00000396342 TMEM150AQ86TG1 271 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 ARL14EPQ8N8R7 260 aaPredicted RBP17.47■□□□□ 0.39
DDR1-229ENST00000396342 OR5B17Q8NGF7 314 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 GAB3Q8WWW8 586 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 MED10Q9BTT4 135 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 BACH2Q9BYV9 841 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 NACA2Q9H009 215 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 EXOC1Q9NV70 894 aa17.47■□□□□ 0.39
DDR1-229ENST00000396342 NXF1Q9UBU9 619 aaKnown RBP17.47■□□□□ 0.39
DDR1-229ENST00000396342 CLIC2O15247 247 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 TACC1O75410 805 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 RHOBTB1O94844 696 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 ZSCAN22P10073 491 aaPredicted RBP17.46■□□□□ 0.39
DDR1-229ENST00000396342 KCNA4P22459 653 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 GJA4P35212 333 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 GALK1P51570 392 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 ATXN1P54253 815 aaKnown RBP17.46■□□□□ 0.39
DDR1-229ENST00000396342 WNT7BP56706 349 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 CYP24A1Q07973 514 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 PREPLQ4J6C6 727 aaPredicted RBP17.46■□□□□ 0.39
DDR1-229ENST00000396342 NUDT18Q6ZVK8 323 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 C11orf74Q86VG3 221 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 OSTM1Q86WC4 334 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 PDZD8Q8NEN9 1154 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 HPS3Q969F9 1004 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 CCDC34Q96HJ3 373 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 TNIP3Q96KP6 325 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 CYP2S1Q96SQ9 504 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 FGFBP2Q9BYJ0 223 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 HPS4Q9NQG7 708 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 ARHGAP26Q9UNA1 814 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 WNT6Q9Y6F9 365 aa17.46■□□□□ 0.39
DDR1-229ENST00000396342 AXIN1O15169 862 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 ATP2C2O75185 946 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 RTN3O95197 1032 aaPredicted RBP17.45■□□□□ 0.38
DDR1-229ENST00000396342 APBB3O95704 486 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 PTPN1P18031 435 aaKnown RBP17.45■□□□□ 0.38
DDR1-229ENST00000396342 LMO2P25791 158 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 AFMP43652 599 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 E2F4Q16254 413 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 KNOP1Q1ED39 458 aaKnown RBP17.45■□□□□ 0.38
DDR1-229ENST00000396342 FSTL4Q6MZW2 842 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 PRR23CQ6ZRP0 262 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 FAM160A2Q8N612 972 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms