RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 PFKMP08237 780 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 KRT7P08729 469 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 ATF2P15336 505 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 KCNE1P15382 129 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 SOWAHAQ2M3V2 549 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 TFDP3Q5H9I0 405 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 FAM183BPQ6ZVS7 135 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 ZNF365Q70YC5 407 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 ARFGAP1Q8N6T3 406 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 SMG8Q8ND04 991 aaKnown RBP12.77□□□□□ -0.36
ITGB1-202ENST00000396033 SNF8Q96H20 258 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 ATP6V1G3Q96LB4 118 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 WHRNQ9P202 907 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 GTF2IRD1Q9UHL9 959 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 NME7Q9Y5B8 376 aa12.77□□□□□ -0.36
ITGB1-202ENST00000396033 hCG_1818297A0A087WSY0 165 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 A8MXQ7 604 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 PIRO00625 290 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 RARBP10826 455 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 VPS41P49754 854 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 IFFO1Q0D2I5 559 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 TMBIM4Q9HC24 238 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 HESX1Q9UBX0 185 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 CTSHP09668 335 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 IL1R2P27930 398 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 PTPN7P35236 360 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 XKR4Q5GH76 650 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 KCNT1Q5JUK3 1230 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 GDF6Q6KF10 455 aaPredicted RBP12.77□□□□□ -0.37
ITGB1-202ENST00000396033 GSTA5Q7RTV2 222 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 RSPH3Q86UC2 560 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 TTC30AQ86WT1 665 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.37
ITGB1-202ENST00000396033 KPNA7A9QM74 516 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 RNF8O76064 485 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-202ENST00000396033 ADCY8P40145 1251 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 PNPLA4P41247 253 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 CDKN2BP42772 138 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 TAF6P49848 677 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 PRKCZQ05513 592 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-202ENST00000396033 DENND2CQ68D51 928 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 CCDC25Q86WR0 208 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 ARRDC4Q8NCT1 418 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 HAUS1Q96CS2 278 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 PABPC3Q9H361 631 aaKnown RBP12.76□□□□□ -0.37
ITGB1-202ENST00000396033 PCSK1NQ9UHG2 260 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 CENPFP49454 3210 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 HMGB1P1B2RPK0 211 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-202ENST00000396033 HCRTO43612 131 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 LIASO43766 372 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 GPD1P21695 349 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 GTF2A1P52655 376 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-202ENST00000396033 TRIM32Q13049 653 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 SLMAPQ14BN4 828 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 UPF3AQ9H1J1 476 aaKnown RBP12.76□□□□□ -0.37
ITGB1-202ENST00000396033 ASNSD1Q9NWL6 643 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 SPTLC1O15269 473 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 SEPT4O43236 478 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 ITIH2P19823 946 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 MAGEA9P43362 315 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 CORO7P57737 925 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 SV2CQ496J9 727 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 PMF1Q6P1K2 205 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 PIWIL1Q96J94 861 aaKnown RBP12.76□□□□□ -0.37
ITGB1-202ENST00000396033 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 DNPEPQ9ULA0 475 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
ITGB1-202ENST00000396033 GRAP2O75791 330 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 PDGFRBP09619 1106 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 SETSIPP0DME0 302 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 MIPP30301 263 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
ITGB1-202ENST00000396033 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
ITGB1-202ENST00000396033 KRT71Q3SY84 523 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 CCDC89Q8N998 374 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 APPL2Q8NEU8 664 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 LPIN3Q9BQK8 851 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 EPB41L4BQ9H329 900 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 FGFR1P11362 822 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 GNL1P36915 607 aaPredicted RBP12.75□□□□□ -0.37
ITGB1-202ENST00000396033 ITGA8P53708 1063 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 EIF3BP55884 814 aaKnown RBP12.75□□□□□ -0.37
ITGB1-202ENST00000396033 LMNB2Q03252 620 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 ACAP1Q15027 740 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 WNT8BQ93098 351 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 GDAP2Q9NXN4 497 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 BCCIPQ9P287 314 aaKnown RBP eCLIP12.75□□□□□ -0.37
ITGB1-202ENST00000396033 ZNF148Q9UQR1 794 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 C3orf70A6NLC5 250 aaPredicted RBP12.75□□□□□ -0.37
ITGB1-202ENST00000396033 CCDC130P13994 396 aa12.75□□□□□ -0.37
ITGB1-202ENST00000396033 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms