RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SELENOSQ9BQE4 189 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 IRX2Q9BZI1 471 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 DMAP1Q9NPF5 467 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 LSM7Q9UK45 103 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 TTLL3Q9Y4R7 772 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 GREB1LQ9C091 1923 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 DHX15O43143 795 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ATP9AO75110 1047 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ATP1A1P05023 1023 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 CYP2B6P20813 491 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 RENBPP51606 427 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ATP11AP98196 1134 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ROR1Q01973 937 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 YWHAHQ04917 246 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 TERF2Q15554 542 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PRAMEF18Q5VWM3 479 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 NT5DC3Q86UY8 548 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 STMN2Q93045 179 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 HES6Q96HZ4 224 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SIKE1Q9BRV8 207 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 APOL6Q9BWW8 343 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 RETREG1Q9H6L5 497 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ABCB6Q9NP58 842 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ACTL7BQ9Y614 415 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 MAD1L1Q9Y6D9 718 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 STYXL1Q9Y6J8 313 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 RBBP6Q7Z6E9 1792 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PCNTO95613 3336 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 LGR5O75473 907 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ALDH2P05091 517 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ARCQ7LC44 396 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF571Q7Z3V5 609 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SDCCAG8Q86SQ7 713 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 AMIGO3Q86WK7 504 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 CREG2Q8IUH2 290 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF670Q9BS34 389 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 DDX47Q9H0S4 455 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 THAP2Q9H0W7 228 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 GPD1P21695 349 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PSMC4P43686 418 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 YWHAGP61981 247 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 KIZQ2M2Z5 673 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF280DQ6N043 979 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SPATA2LQ8IUW3 424 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 CEP120Q8N960 986 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SEPT8Q92599 483 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 GOLPH3Q9H4A6 298 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PNPLA8Q9NP80 782 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.54□□□□□ -1.849e-8■■■□□ 18.8
VPS13C-203ENST00000395896 HACD3Q9P035 362 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 TRIM33Q9UPN9 1127 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 TDRD15B5MCY1 1934 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ZSCAN5CA6NGD5 496 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF862O60290 1169 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 F2P00734 622 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 GSTA2P09210 222 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ARF4P18085 180 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 HARS2P49590 506 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 CASP5P51878 434 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 TPI1P60174 286 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PPP3CAQ08209 521 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 IRF2BP2Q7Z5L9 587 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SIAH1Q8IUQ4 282 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 MCOLN2Q8IZK6 566 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SLAIN1Q8ND83 568 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 CYFIP2Q96F07 1278 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 NUDCD1Q96RS6 583 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PAIP2Q9BPZ3 127 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 OPHN1O60890 802 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PPP1R37O75864 691 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ARL2P36404 184 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 GUCY2FP51841 1108 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 CAPSQ13938 189 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 MRPL40Q9NQ50 206 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 DRG1Q9Y295 367 aaKnown RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF536O15090 1300 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 GOLGA8MH3BSY2 632 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 NOS2P35228 1153 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 MAPK8P45983 427 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 IFRD2Q12894 506 aaPredicted RBP3.54□□□□□ -1.84
VPS13C-203ENST00000395896 TSNAXIP1Q2TAA8 658 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 DCAF6Q58WW2 860 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SH2D4BQ5SQS7 431 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 AGBL2Q5U5Z8 902 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 PHLDB3Q6NSJ2 640 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 LCA5Q86VQ0 697 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 MCEEQ96PE7 176 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 GANQ9H2C0 597 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 FZD8Q9H461 694 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC19Q9H756 370 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 EPS15L1Q9UBC2 864 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 HEY1Q9Y5J3 304 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 ADM5C9JUS6 153 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 B3GNT9Q6UX72 402 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SLC24A5Q71RS6 500 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 SLFN11Q7Z7L1 901 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 UNC45BQ8IWX7 931 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC71Q8N4P6 559 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 RNPEPQ9H4A4 650 aa3.54□□□□□ -1.84
VPS13C-203ENST00000395896 FGF10O15520 208 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms