RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 BDNFP23560 247 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 DDX6P26196 483 aaKnown RBP eCLIP17.29■□□□□ 0.36
CXCL12-206ENST00000395795 SATB1Q01826 763 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 CCINQ13939 588 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 ZNF268Q14587 947 aaPredicted RBP17.29■□□□□ 0.36
CXCL12-206ENST00000395795 TRIM68Q6AZZ1 485 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 RALGPS2Q86X27 583 aaPredicted RBP17.29■□□□□ 0.36
CXCL12-206ENST00000395795 CSGALNACT1Q8TDX6 532 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 SPATA17Q96L03 361 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 SPATA32Q96LK8 384 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 FNBP1Q96RU3 617 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 CYP2S1Q96SQ9 504 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 TTLL2Q9BWV7 592 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 TDP1Q9NUW8 608 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 ZSCAN32Q9NX65 697 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 USP25Q9UHP3 1055 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 ZMYM5Q9UJ78 669 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 PCDHGA2Q9Y5H1 932 aa17.29■□□□□ 0.36
CXCL12-206ENST00000395795 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 K7ESF4 209 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 PDXKO00764 312 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 DPYSL4O14531 572 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 EXOC3O60645 756 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 ARSAP15289 507 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 KRT85P78386 507 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 PLCB2Q00722 1185 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 DPYDQ12882 1025 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 USP4Q13107 963 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 PSMD2Q13200 908 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 ZNF77Q15935 545 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 TAF12Q16514 161 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 WDR72Q3MJ13 1102 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 NAIF1Q69YI7 327 aaPredicted RBP17.28■□□□□ 0.36
CXCL12-206ENST00000395795 VSTM1Q6UX27 236 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 PAQR9Q6ZVX9 377 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 SCN4BQ8IWT1 228 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 DCLK2Q8N568 766 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 GCNAQ96QF7 691 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 MMS19Q96T76 1030 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 IER2Q9BTL4 223 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 B3GNT5Q9BYG0 378 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 SMYD3Q9H7B4 428 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 FBRSL1Q9HCM7 1045 aaKnown RBP17.28■□□□□ 0.36
CXCL12-206ENST00000395795 EXOC1Q9NV70 894 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 MAGEC2Q9UBF1 373 aaPredicted RBP17.28■□□□□ 0.36
CXCL12-206ENST00000395795 ZNF292O60281 2723 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
CXCL12-206ENST00000395795 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 RHOBTB3O94955 611 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 RPN1P04843 607 aaKnown RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 PTPN1P18031 435 aaKnown RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 ATICP31939 592 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 GNL1P36915 607 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 KPNA1P52294 538 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 CDH8P55286 799 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 MCCD1P59942 119 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 DMWDQ09019 674 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 PON2Q15165 354 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 MDH1BQ5I0G3 518 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 PKN3Q6P5Z2 889 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 ZC3H14Q6PJT7 736 aaKnown RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 C4orf50Q6ZRC1 276 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 MRPS31Q92665 395 aaKnown RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 ZNF518BQ9C0D4 1074 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 EPC1Q9H2F5 836 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 EBF3Q9H4W6 596 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 UXTQ9UBK9 157 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-206ENST00000395795 TRAF3IP3Q9Y228 551 aa17.27■□□□□ 0.36
CXCL12-206ENST00000395795 CLDN5O00501 218 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 PAPSS2O95340 614 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-206ENST00000395795 NR3C1P04150 777 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 MYL1P05976 194 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 AVPR1AP37288 418 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 SYKP43405 635 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 RUNX3Q13761 415 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 ITPRIPL2Q3MIP1 535 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 ZACNQ401N2 412 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 TMEM196Q5HYL7 178 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 FSTL4Q6MZW2 842 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 KRBA2Q6ZNG9 492 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 SPEM1Q8N4L4 309 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 ARL14EPQ8N8R7 260 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-206ENST00000395795 GOLGA5Q8TBA6 731 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 EZH1Q92800 747 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-206ENST00000395795 C8orf48Q96LL4 319 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 CEP295NLQ96MC4 621 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 KIF9Q9HAQ2 790 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 GDPD2Q9HCC8 539 aa17.26■□□□□ 0.35
CXCL12-206ENST00000395795 NXF1Q9UBU9 619 aaKnown RBP17.26■□□□□ 0.35
CXCL12-206ENST00000395795 F8VP50 259 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 KINO60870 393 aaKnown RBP17.25■□□□□ 0.35
CXCL12-206ENST00000395795 OLFM2O95897 454 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 TCF3P15923 654 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 TGM1P22735 817 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 RAP1GAPP47736 663 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 NOP14P78316 857 aaKnown RBP17.25■□□□□ 0.35
CXCL12-206ENST00000395795 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 FAM160A1Q05DH4 1040 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms