RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ZSCAN16Q9H4T2 348 aaPredicted RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 PARVGQ9HBI0 331 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 TPSG1Q9NRR2 321 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 EPS15L1Q9UBC2 864 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SEL1LQ9UBV2 794 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CDH22Q9UJ99 828 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 MAFFQ9ULX9 164 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 GDAQ9Y2T3 454 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SRPRBQ9Y5M8 271 aaKnown RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CCDC195A0A1B0GUA6 201 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 TTC26A0AVF1 554 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 K7ELQ4 463 aaPredicted RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 MEFVO15553 781 aaPredicted RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 B3GAT3O94766 335 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 GSTP1P09211 210 aaKnown RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 CLTAP09496 248 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 GLB1P16278 677 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 PLCG1P19174 1290 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 SYT1P21579 422 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 BMP6P22004 513 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 LRPAP1P30533 357 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 AARSP49588 968 aaKnown RBP eCLIP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 CLCNKBP51801 687 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 GTF2BQ00403 316 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 GRIN1Q05586 938 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 SOX4Q06945 474 aaPredicted RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 ZNF252P-AS1Q0IIN9 211 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 ZBTB6Q15916 424 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 SLC10A6Q3KNW5 377 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 HP1BP3Q5SSJ5 553 aaPredicted RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 FAM171A1Q5VUB5 890 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 PRSS55Q6UWB4 352 aaPredicted RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 HAUS6Q7Z4H7 955 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 SUGP1Q8IWZ8 645 aaKnown RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 CD302Q8IX05 232 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 SNX21Q969T3 373 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 FAM46AQ96IP4 442 aaKnown RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 ZMAT2Q96NC0 199 aaKnown RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 APOL5Q9BWW9 433 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 IRF2BPLQ9H1B7 796 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 CXCL16Q9H2A7 254 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 RAPGEFL1Q9UHV5 662 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 FBXO2Q9UK22 296 aaPredicted RBP6.67□□□□□ -1.34
PTPN20-208ENST00000395727 DUSP12Q9UNI6 340 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 STYXL1Q9Y6J8 313 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 MYH15Q9Y2K3 1946 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 MYH11P35749 1972 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 CITO14578 2027 aa6.67□□□□□ -1.34
PTPN20-208ENST00000395727 A0A0B4J269 797 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 ARHGEF37A1IGU5 675 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 FRMD3A2A2Y4 597 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 VPS37CA5D8V6 355 aaPredicted RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 ANHXE9PGG2 379 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 PODXLO00592 558 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 HNRNPDLO14979 420 aaKnown RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 OGTO15294 1046 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 XPOTO43592 962 aaKnown RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 N4BP1O75113 896 aaKnown RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 RFPL2O75678 378 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 ABLIM3O94929 683 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 TIAF1O95411 115 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 C8AP07357 584 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 WEE2P0C1S8 567 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 LIG1P18858 919 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 DDIT3P35638 169 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 NASPP49321 788 aaPredicted RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 CLCN5P51795 746 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 TDGQ13569 410 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 ALCAMQ13740 583 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 SLC39A14Q15043 492 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 KARSQ15046 597 aaKnown RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 GLRA4Q5JXX5 417 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 LIN9Q5TKA1 542 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 TPGS2Q68CL5 300 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 GPBP1Q86WP2 473 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 TCEAL8Q8IYN2 117 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 ZNF461Q8TAF7 563 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 SMG7Q92540 1137 aaKnown RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 ZBTB45Q96K62 511 aaPredicted RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 B3GALT6Q96L58 329 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 TCHPQ9BT92 498 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 STRA6Q9BX79 667 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 CCDC86Q9H6F5 360 aaKnown RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 KCNK12Q9HB15 430 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 GOLGA2P5Q9HBQ8 144 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 POLD4Q9HCU8 107 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 OLFML3Q9NRN5 406 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 KRT82Q9NSB4 513 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 CACNG4Q9UBN1 327 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 KCNH3Q9ULD8 1083 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 TBX20Q9UMR3 447 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 UBQLN1Q9UMX0 589 aaKnown RBP6.66□□□□□ -1.34
PTPN20-208ENST00000395727 MTMR6Q9Y217 621 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 DERAQ9Y315 318 aa6.66□□□□□ -1.34
PTPN20-208ENST00000395727 TSC2P49815 1807 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms