RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ASB3Q9Y575 518 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 DOCK6Q96HP0 2047 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 GTPBP10A4D1E9 387 aaKnown RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 MOSPD3O75425 235 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 CALCAP01258 141 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 HMGA1P17096 107 aaKnown RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 COPB1P53618 953 aaKnown RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 EPHA5P54756 1037 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 GCNT1Q02742 428 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 IQCB1Q15051 598 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 TTC39CQ8N584 583 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 SHKBP1Q8TBC3 707 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 FGF13Q92913 245 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 ACSF2Q96CM8 615 aaPredicted RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 HEXIM2Q96MH2 286 aaKnown RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 CBX8Q9HC52 389 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 AVENQ9NQS1 362 aaPredicted RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 LIMA1Q9UHB6 759 aaKnown RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 AJAP1Q9UKB5 411 aaPredicted RBP21.15■□□□□ 0.98
SNCA-203ENST00000394986 PCDHB4Q9Y5E5 795 aa21.15■□□□□ 0.98
SNCA-203ENST00000394986 A0A1W2PRU2 124 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 SLC38A8A6NNN8 435 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 AP1G2O75843 785 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 BEST1O76090 585 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 CDK11BP21127 795 aaKnown RBP21.14■□□□□ 0.98
SNCA-203ENST00000394986 YWHAEP62258 255 aaKnown RBP21.14■□□□□ 0.98
SNCA-203ENST00000394986 TAF12Q16514 161 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 TMEM270Q6UE05 265 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 GAREM2Q75VX8 874 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 NPAS3Q8IXF0 933 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 CYFIP2Q96F07 1278 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 KCNK16Q96T55 309 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 IL21Q9HBE4 155 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 APEX2Q9UBZ4 518 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 CDH7Q9ULB5 785 aa21.14■□□□□ 0.98
SNCA-203ENST00000394986 ATP8B3O60423 1300 aa21.14■□□□□ 0.97
SNCA-203ENST00000394986 TRIM66O15016 1216 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 ANXA13P27216 316 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 GABRR2P28476 465 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 KCNMA1Q12791 1236 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 TEAD2Q15562 447 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 STXBP5Q5T5C0 1151 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 PPP1R26Q5T8A7 1209 aaPredicted RBP21.13■□□□□ 0.97
SNCA-203ENST00000394986 APTXQ7Z2E3 356 aaKnown RBP21.13■□□□□ 0.97
SNCA-203ENST00000394986 LUZP1Q86V48 1076 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 MCRS1Q96EZ8 462 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 SMARCD1Q96GM5 515 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 C8orf48Q96LL4 319 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 HNRNPABQ99729 332 aaKnown RBP21.13■□□□□ 0.97
SNCA-203ENST00000394986 SMOQ99835 787 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 FAM124BQ9H5Z6 455 aaPredicted RBP21.13■□□□□ 0.97
SNCA-203ENST00000394986 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.13■□□□□ 0.97
SNCA-203ENST00000394986 LIMD1Q9UGP4 676 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 NOTCH4Q99466 2003 aa21.13■□□□□ 0.97
SNCA-203ENST00000394986 SMTNL1A8MU46 457 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 BECN2A8MW95 431 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 RNF225M0QZC1 329 aaPredicted RBP21.12■□□□□ 0.97
SNCA-203ENST00000394986 NOL4O94818 638 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 ASGR2P07307 311 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 CSH1P0DML2 217 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 CSH2P0DML3 217 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 TRIM21P19474 475 aaKnown RBP21.12■□□□□ 0.97
SNCA-203ENST00000394986 KLK7P49862 253 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 USP46P62068 366 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 CYP4F8P98187 520 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 ARHGAP44Q17R89 818 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 DPY19L2P1Q6NXN4 242 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 RNF135Q8IUD6 432 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 ZDHHC14Q8IZN3 488 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 LEMD2Q8NC56 503 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 RBBP8NLQ8NC74 664 aaPredicted RBP21.12■□□□□ 0.97
SNCA-203ENST00000394986 ZMIZ2Q8NF64 920 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 KHSRPQ92945 711 aaKnown RBP eCLIP21.12■□□□□ 0.97
SNCA-203ENST00000394986 SPATA17Q96L03 361 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 LSM14BQ9BX40 385 aaKnown RBP21.12■□□□□ 0.97
SNCA-203ENST00000394986 DMAP1Q9NPF5 467 aaPredicted RBP21.12■□□□□ 0.97
SNCA-203ENST00000394986 ZNF197O14709 1029 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 TPM2P07951 284 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 LAMP2P13473 410 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 CD19P15391 556 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 MAP3K7CLP57077 242 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 ANKRD20A12PQ8NF67 263 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 JAKMIP2Q96AA8 810 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 ATXN3LQ9H3M9 355 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 EPS15L1Q9UBC2 864 aa21.12■□□□□ 0.97
SNCA-203ENST00000394986 PTPRDP23468 1912 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 FAM200BP0CF97 657 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 KRT5P13647 590 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 IFRD2Q12894 506 aaPredicted RBP21.11■□□□□ 0.97
SNCA-203ENST00000394986 CLEC20AQ6ZU45 233 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 DENND5BQ6ZUT9 1274 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 TMEM150AQ86TG1 271 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 PLCD3Q8N3E9 789 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 RSAD2Q8WXG1 361 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 ZSWIM3Q96MP5 696 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 DNAI2Q9GZS0 605 aa21.11■□□□□ 0.97
SNCA-203ENST00000394986 BDP1A6H8Y1 2624 aa21.1■□□□□ 0.97
SNCA-203ENST00000394986 LGALS16A8MUM7 142 aa21.1■□□□□ 0.97
SNCA-203ENST00000394986 TADA3O75528 432 aa21.1■□□□□ 0.97
SNCA-203ENST00000394986 PNMA6AP0CW24 399 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms