RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 NR1H3Q13133 447 aa22.66■■□□□ 1.22
TRAF4-203ENST00000394925 L1TD1Q5T7N2 865 aaKnown RBP22.66■■□□□ 1.22
TRAF4-203ENST00000394925 LRRC52Q8N7C0 313 aa22.66■■□□□ 1.22
TRAF4-203ENST00000394925 SH3RF2Q8TEC5 729 aa22.66■■□□□ 1.22
TRAF4-203ENST00000394925 NOC3LQ8WTT2 800 aaKnown RBP22.66■■□□□ 1.22
TRAF4-203ENST00000394925 LINC00597Q9H2U6 94 aa22.66■■□□□ 1.22
TRAF4-203ENST00000394925 GDAP2Q9NXN4 497 aa22.66■■□□□ 1.22
TRAF4-203ENST00000394925 BCLAF3A2AJT9 711 aaKnown RBP22.65■■□□□ 1.22
TRAF4-203ENST00000394925 GOLGA8IPA6NC78 632 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 C2orf78A6NCI8 922 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 GOLGA8JA6NMD2 632 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 GCNT3O95395 438 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 KCNB1Q14721 858 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 CFAP221Q4G0U5 840 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 BRAPQ7Z569 592 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 ADGRF2Q8IZF7 708 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 FSIP1Q8NA03 581 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 CXorf38Q8TB03 319 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 GCNT4Q9P109 453 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 SEL1LQ9UBV2 794 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 ITGA11Q9UKX5 1188 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 THADAQ6YHU6 1953 aa22.65■■□□□ 1.22
TRAF4-203ENST00000394925 MYMKA6NI61 221 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 C4orf47A7E2U8 309 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 LDHAP00338 332 aaKnown RBP22.64■■□□□ 1.21
TRAF4-203ENST00000394925 HDCP19113 662 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 PCSK1P29120 753 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 LHX1P48742 406 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 RBP5P82980 135 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 SYCP3Q8IZU3 236 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 TOP6BLQ8N6T0 577 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 TSTD1Q8NFU3 115 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 DNAJC19Q96DA6 116 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 FUBP3Q96I24 572 aaKnown RBP eCLIP22.64■■□□□ 1.21
TRAF4-203ENST00000394925 TPSD1Q9BZJ3 242 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 PDE11AQ9HCR9 933 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 STK17AQ9UEE5 414 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 CCDC39Q9UFE4 941 aa22.64■■□□□ 1.21
TRAF4-203ENST00000394925 GABRDO14764 452 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 ATP2C2O75185 946 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 GAP43P17677 238 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 GARTP22102 1010 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 NOVA1P51513 510 aaKnown RBP22.63■■□□□ 1.21
TRAF4-203ENST00000394925 CASP5P51878 434 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 SEC13P55735 322 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 SOWAHAQ2M3V2 549 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 C2orf27AQ580R0 203 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 SPATA18Q8TC71 538 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 CBWD1Q9BRT8 395 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 MTMR12Q9C0I1 747 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 PCIF1Q9H4Z3 704 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 SIX4Q9UIU6 781 aa22.63■■□□□ 1.21
TRAF4-203ENST00000394925 HELZP42694 1942 aaKnown RBP22.63■■□□□ 1.21
TRAF4-203ENST00000394925 GIPC1O14908 333 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 TMEM191BP0C7N4 346 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 USP39Q53GS9 565 aaKnown RBP22.62■■□□□ 1.21
TRAF4-203ENST00000394925 RRAGBQ5VZM2 374 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 LMBRD2Q68DH5 695 aaPredicted RBP22.62■■□□□ 1.21
TRAF4-203ENST00000394925 FAM171BQ6P995 826 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 SV2BQ7L1I2 683 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 CCDC26Q8TAB7 109 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 USP33Q8TEY7 942 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 MAGEC2Q9UBF1 373 aaPredicted RBP22.62■■□□□ 1.21
TRAF4-203ENST00000394925 ARHGAP26Q9UNA1 814 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.62■■□□□ 1.21
TRAF4-203ENST00000394925 PCDHB13Q9Y5F0 798 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 CLIC4Q9Y696 253 aa22.62■■□□□ 1.21
TRAF4-203ENST00000394925 LNP1A1A4G5 178 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 ANTXRLA6NF34 631 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 NFATC1O95644 943 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 IDEP14735 1019 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 MAGEA11P43364 429 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 PSMC1P62191 440 aaKnown RBP22.61■■□□□ 1.21
TRAF4-203ENST00000394925 DAB2IPQ5VWQ8 1189 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 PMS2CLQ68D20 193 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 ANO7Q6IWH7 933 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 C4orf50Q6ZRC1 276 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 SYT15Q9BQS2 421 aa22.61■■□□□ 1.21
TRAF4-203ENST00000394925 R3HCC1Q9Y3T6 440 aaKnown RBP22.61■■□□□ 1.21
TRAF4-203ENST00000394925 K7EQS6 105 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 TCF3P15923 654 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 BDNFP23560 247 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 LMO2P25791 158 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 OPRD1P41143 372 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 ZXDBP98169 803 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 C11orf74Q86VG3 221 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 TTC30AQ86WT1 665 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 CCDC33Q8N5R6 958 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 MYLPFQ96A32 169 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 ANKRD36BP1Q96IX9 119 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 FGFBP2Q9BYJ0 223 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 OLFML3Q9NRN5 406 aa22.6■■□□□ 1.21
TRAF4-203ENST00000394925 RALYQ9UKM9 306 aaKnown RBP22.6■■□□□ 1.21
TRAF4-203ENST00000394925 LEFTY2O00292 366 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 KHNYNO15037 678 aaKnown RBP22.59■■□□□ 1.21
TRAF4-203ENST00000394925 PROS1P07225 676 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 BCKDHBP21953 392 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 GRIK1P39086 918 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 PDE6CP51160 858 aa22.59■■□□□ 1.21
TRAF4-203ENST00000394925 USP46P62068 366 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms