RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 YARSP54577 528 aaKnown RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 SLFN11Q7Z7L1 901 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 TMEM161BQ8NDZ6 487 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 DEPDC1BQ8WUY9 529 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 SCYL1Q96KG9 808 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 HERPUD2Q9BSE4 406 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 KCND2Q9NZV8 630 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 WASF2Q9Y6W5 498 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 IQANK1A0A1B0GTG1 560 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 KRT3P12035 628 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 VHLP40337 213 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 AQP5P55064 265 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 ASPHQ12797 758 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 PEX6Q13608 980 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 CUL3Q13618 768 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 TCHHL1Q5QJ38 904 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 FAM102AQ5T9C2 384 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 CES2O00748 559 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 ATP5HO75947 161 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 F7P08709 466 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 FAAP100Q0VG06 881 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 IFRD2Q12894 506 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 MKRN3Q13064 507 aaKnown RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 RASA2Q15283 850 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 IYDQ6PHW0 289 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 LRRC71Q8N4P6 559 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 TMEM35BQ8NCS4 154 aa13.83□□□□□ -0.2
NFKB1-202ENST00000394820 PPWD1Q96BP3 646 aaKnown RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 RBM41Q96IZ5 413 aaKnown RBP13.83□□□□□ -0.2
NFKB1-202ENST00000394820 LY75O60449 1722 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 FCHO1O14526 889 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 AIM2O14862 343 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CDH8P55286 799 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CRADDP78560 199 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 NR1H3Q13133 447 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 NCOA4Q13772 614 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 ZBTB41Q5SVQ8 909 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 WLSQ5T9L3 541 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CENPTQ96BT3 561 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 AS3MTQ9HBK9 375 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 TMEM8AQ9HCN3 771 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 DDX18Q9NVP1 670 aaKnown RBP13.82□□□□□ -0.2
NFKB1-202ENST00000394820 SLC12A4Q9UP95 1085 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 UBE4BO95155 1302 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 GOLGA8QA0A0J9YX86 632 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 GOLGA8OA6NCC3 632 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 C5orf60A6NFR6 353 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 GOLGA8NF8WBI6 632 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 ELK3P41970 407 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CAV1Q03135 178 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CES3Q6UWW8 571 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 NPNTQ6UXI9 565 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 TRIM50Q86XT4 487 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 C4orf19Q8IY42 314 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 MCUQ8NE86 351 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 FEZF2Q8TBJ5 459 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CAMKK2Q96RR4 588 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
NFKB1-202ENST00000394820 FBXO40Q9UH90 709 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 GGA2Q9UJY4 613 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CEP350Q5VT06 3117 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 PGM3O95394 542 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 GEMIN4P57678 1058 aaKnown RBP13.82□□□□□ -0.2
NFKB1-202ENST00000394820 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 PRPF31Q8WWY3 499 aaKnown RBP13.82□□□□□ -0.2
NFKB1-202ENST00000394820 DCLRE1BQ9H816 532 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 PARVAQ9NVD7 372 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 NMRK1Q9NWW6 199 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
NFKB1-202ENST00000394820 ADGRA3Q8IWK6 1321 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 CYB561D2O14569 222 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 KRT37O76014 449 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 PTPN4P29074 926 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 SFNP31947 248 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 ZNF268Q14587 947 aaPredicted RBP13.81□□□□□ -0.2
NFKB1-202ENST00000394820 TEX9Q8N6V9 391 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
NFKB1-202ENST00000394820 ANKRD31Q8N7Z5 1873 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 PROSCO94903 275 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 MRPS35P82673 323 aaKnown RBP13.81□□□□□ -0.2
NFKB1-202ENST00000394820 SLC25A3Q00325 362 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 CLEC16AQ2KHT3 1053 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 SH2D4BQ5SQS7 431 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 TXNRD3NBQ6F5E7 133 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 DNAAF3Q8N9W5 541 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 CYP26B1Q9NR63 512 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 ANGPTL2Q9UKU9 493 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 SCINQ9Y6U3 715 aa13.81□□□□□ -0.2
NFKB1-202ENST00000394820 PGK2P07205 417 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 GZMAP12544 262 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ZNF200P98182 395 aaPredicted RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 GTF2BQ00403 316 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 EMC2Q15006 297 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 MAPK6Q16659 721 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 KBTBD12Q3ZCT8 623 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 MMEL1Q495T6 779 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms