RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 FBXO28Q9NVF7 368 aa19.75■□□□□ 0.75
HOXC6-202ENST00000394331 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.75■□□□□ 0.75
HOXC6-202ENST00000394331 FTLP02792 175 aaPredicted RBP19.74■□□□□ 0.75
HOXC6-202ENST00000394331 ALDH2P05091 517 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 ICAM1P05362 532 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 DLDP09622 509 aaKnown RBP19.74■□□□□ 0.75
HOXC6-202ENST00000394331 CAP2P40123 477 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 CCDC142Q17RM4 750 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 PRUNE1Q86TP1 453 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 C12orf56Q8IXR9 622 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 C4orf33Q8N1A6 199 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 LMO3Q8TAP4 145 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 C1orf54Q8WWF1 131 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 ACCSQ96QU6 501 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 SLC7A8Q9UHI5 535 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 CCPG1Q9ULG6 757 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 CNTNAP1P78357 1384 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 SMCHD1A6NHR9 2005 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 B2RBV5 119 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 FCHO1O14526 889 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 ATP5BP06576 529 aaKnown RBP19.74■□□□□ 0.75
HOXC6-202ENST00000394331 IRX4P78413 519 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 TBCCQ15814 346 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 CLEC16AQ2KHT3 1053 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 PDCD4Q53EL6 469 aaKnown RBP19.74■□□□□ 0.75
HOXC6-202ENST00000394331 SFT2D3Q587I9 215 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 KLHL35Q6PF15 583 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 GMLQ99445 158 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 MANSC1Q9H8J5 431 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 KCNH7Q9NS40 1196 aa19.74■□□□□ 0.75
HOXC6-202ENST00000394331 SEPT11Q9NVA2 429 aaKnown RBP19.74■□□□□ 0.75
HOXC6-202ENST00000394331 C15orf38-AP3S2A0A0A6YYH1 394 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 TMEM110-MUSTN1A8MSY1 372 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 DDX39AO00148 427 aaKnown RBP19.73■□□□□ 0.75
HOXC6-202ENST00000394331 FOXN3O00409 490 aaPredicted RBP19.73■□□□□ 0.75
HOXC6-202ENST00000394331 BAG2O95816 211 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 CLPTM1O96005 669 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 PTGER2P43116 358 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 MTTPP55157 894 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 PDE1BQ01064 536 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 ARPINQ7Z6K5 226 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 CHSY1Q86X52 802 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 ALKBH8Q96BT7 664 aaKnown RBP19.73■□□□□ 0.75
HOXC6-202ENST00000394331 TSSK1BQ9BXA7 367 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 DCLK3Q9C098 648 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 FBXO6Q9NRD1 293 aaPredicted RBP19.73■□□□□ 0.75
HOXC6-202ENST00000394331 PSMC3IPQ9P2W1 217 aaPredicted RBP19.73■□□□□ 0.75
HOXC6-202ENST00000394331 EP400Q96L91 3159 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 GSTTP1A0A1W2PQM5 241 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 DENRO43583 198 aaKnown RBP19.73■□□□□ 0.75
HOXC6-202ENST00000394331 SPOPO43791 374 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 CBFA2T3O75081 653 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 RRM1P23921 792 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 VAMP7P51809 220 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 MMEL1Q495T6 779 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 MCF2L2Q86YR7 1114 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 MTBPQ96DY7 904 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 RBM15Q96T37 977 aaKnown RBP eCLIP19.73■□□□□ 0.75
HOXC6-202ENST00000394331 ARHGEF38Q9NXL2 777 aa19.73■□□□□ 0.75
HOXC6-202ENST00000394331 TMEM247A6NEH6 219 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 CASQ2O14958 399 aaPredicted RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 CLDN3O15551 220 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 SNRPFP62306 86 aaKnown RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 CREB5Q02930 508 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 USP41Q3LFD5 358 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 C1orf146Q5VVC0 180 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 DQX1Q8TE96 717 aaKnown RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 PRR11Q96HE9 360 aaPredicted RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 TSPAN18Q96SJ8 248 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 TMEM98Q9Y2Y6 226 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 NFASCO94856 1347 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 EMSYQ7Z589 1322 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 ASNSP08243 561 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 PLS3P13797 630 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 HOXD12P35452 270 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 PIK3CAP42336 1068 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 DHRS4L2Q6PKH6 230 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 CENPUQ71F23 418 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 FAM83AQ86UY5 434 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 SLC15A3Q8IY34 581 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 RBM15BQ8NDT2 890 aaKnown RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 UBE2TQ9NPD8 197 aaPredicted RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 CHST7Q9NS84 486 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 ZHX2Q9Y6X8 837 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 RAD17O75943 681 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 LYPLA2O95372 231 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 GZMAP12544 262 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 IZUMO3Q5VZ72 239 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 DNAJC14Q6Y2X3 702 aaPredicted RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 SNRNP27Q8WVK2 155 aaKnown RBP19.72■□□□□ 0.75
HOXC6-202ENST00000394331 SPIRE2Q8WWL2 714 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 JADE3Q92613 823 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 ABHD8Q96I13 439 aa19.72■□□□□ 0.75
HOXC6-202ENST00000394331 SH3PXD2BA1X283 911 aa19.71■□□□□ 0.75
HOXC6-202ENST00000394331 LRRN2O75325 713 aa19.71■□□□□ 0.75
HOXC6-202ENST00000394331 USP1O94782 785 aa19.71■□□□□ 0.75
HOXC6-202ENST00000394331 QARSP47897 775 aaKnown RBP19.71■□□□□ 0.75
HOXC6-202ENST00000394331 RARRES1P49788 294 aa19.71■□□□□ 0.75
HOXC6-202ENST00000394331 DLG1Q12959 904 aa19.71■□□□□ 0.75
HOXC6-202ENST00000394331 EAPPQ56P03 285 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms