RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 WHRNQ9P202 907 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 C17orf102A2RUQ5 167 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 PGK1P00558 417 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 FGFR1P11362 822 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 ATF2P15336 505 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 ITIH2P19823 946 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 GABRB2P47870 512 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 PURAQ00577 322 aaKnown RBP15.86■□□□□ 0.13
GPC3-202ENST00000394299 BYSLQ13895 437 aaKnown RBP15.86■□□□□ 0.13
GPC3-202ENST00000394299 TFDP3Q5H9I0 405 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 ZNF365Q70YC5 407 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 SCUBE3Q8IX30 993 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 EPS8L3Q8TE67 593 aaKnown RBP15.86■□□□□ 0.13
GPC3-202ENST00000394299 HSPH1Q92598 858 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 FAXDC2Q96IV6 333 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 TMEM121Q9BTD3 319 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 CDC42EP4Q9H3Q1 356 aaKnown RBP15.86■□□□□ 0.13
GPC3-202ENST00000394299 ANAPC5Q9UJX4 755 aa15.86■□□□□ 0.13
GPC3-202ENST00000394299 TJP3O95049 919 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 RARGP13631 454 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 KLRC2P26717 231 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 IFI35P80217 286 aaPredicted RBP15.85■□□□□ 0.13
GPC3-202ENST00000394299 PLCB3Q01970 1234 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 TRIM32Q13049 653 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 CXCL17Q6UXB2 119 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 NT5DC4Q86YG4 428 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 BEST2Q8NFU1 509 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 GRK7Q8WTQ7 553 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 WNT8BQ93098 351 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 PEBP4Q96S96 227 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 OSBPL7Q9BZF2 842 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 GABRQQ9UN88 632 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 STAU1O95793 577 aaKnown RBP15.85■□□□□ 0.13
GPC3-202ENST00000394299 MYCNP04198 464 aaPredicted RBP15.85■□□□□ 0.13
GPC3-202ENST00000394299 KDELR1P24390 212 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 CETN2P41208 172 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 ATP11AP98196 1134 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 KYNUQ16719 465 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 P3H1Q32P28 736 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 GNASQ5JWF2 1037 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 TAB3Q8N5C8 712 aaPredicted RBP15.85■□□□□ 0.13
GPC3-202ENST00000394299 SMG8Q8ND04 991 aaKnown RBP15.85■□□□□ 0.13
GPC3-202ENST00000394299 RXFP2Q8WXD0 754 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 ZFP42Q96MM3 310 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 CFAP57Q96MR6 1250 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 APBA2Q99767 749 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 MIS12Q9H081 205 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 CNTN3Q9P232 1028 aa15.85■□□□□ 0.13
GPC3-202ENST00000394299 FOXO6A8MYZ6 492 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 EIF3HO15372 352 aaKnown RBP eCLIP15.84■□□□□ 0.132e-6■□□□□ 11.1
GPC3-202ENST00000394299 CST8O60676 142 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 NUDT17P0C025 328 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 CCDC130P13994 396 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 AFF1P51825 1210 aaKnown RBP15.84■□□□□ 0.13
GPC3-202ENST00000394299 SEC24CP53992 1094 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 HP1BP3Q5SSJ5 553 aaPredicted RBP15.84■□□□□ 0.13
GPC3-202ENST00000394299 IZUMO3Q5VZ72 239 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 MDM1Q8TC05 714 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 CLEC4CQ8WTT0 213 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 WDR35Q9P2L0 1181 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 IPPQ9Y573 584 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 A8MXQ7 604 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 IGHA2P01877 340 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 PDGFRAP16234 1089 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 ADORA2BP29275 332 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 GBP1P32455 592 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 NRLP54845 237 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 CDC42EP1Q00587 391 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 CAP1Q01518 475 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 KBTBD7Q8WVZ9 684 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 ADAM7Q9H2U9 754 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 ZFYVE28Q9HCC9 887 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 HOMER3Q9NSC5 361 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 DDX56Q9NY93 547 aaKnown RBP15.84■□□□□ 0.13
GPC3-202ENST00000394299 FEZ2Q9UHY8 353 aaPredicted RBP15.84■□□□□ 0.13
GPC3-202ENST00000394299 USP18Q9UMW8 372 aa15.84■□□□□ 0.13
GPC3-202ENST00000394299 FAM155AB1AL88 458 aaPredicted RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 PIRO00625 290 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 TRUB2O95900 331 aaKnown RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 IFNB1P01574 187 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 CTSHP09668 335 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 TFE3P19532 575 aaPredicted RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 IBSPP21815 317 aaPredicted RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 SLMAPQ14BN4 828 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 LONRF1Q17RB8 773 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 PKDCCQ504Y2 493 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 FAM228AQ86W67 206 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 KCTD6Q8NC69 237 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 BCAS4Q8TDM0 211 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 FNIP1Q8TF40 1166 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 KHSRPQ92945 711 aaKnown RBP eCLIP15.83■□□□□ 0.124e-7■■□□□ 14.3
GPC3-202ENST00000394299 GPATCH2LQ9NWQ4 482 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 RSPH14Q9UHP6 348 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 DERAQ9Y315 318 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 C2CD4BA6NLJ0 364 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 RPS6KA5O75582 802 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 SLC10A3P09131 477 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 MDH1P40925 334 aaKnown RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 ARSEP51690 589 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms