RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CASP5P51878 434 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 RBBP4Q09028 425 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 MPP2Q14168 576 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 PRR23BQ6ZRT6 265 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 E2F7Q96AV8 911 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 AIFM2Q9BRQ8 373 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 GSDMCQ9BYG8 508 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 DDX18Q9NVP1 670 aaKnown RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 PLCL2Q9UPR0 1127 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 STX16-NPEPL1H3BU86 382 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 STX16O14662 325 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 RTN2O75298 545 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 ALDH1A1P00352 501 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 OSTNP61366 133 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 CHI3L2Q15782 390 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 MIGA2Q7L4E1 593 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 OOSP2Q86WS3 158 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 MMADHCQ9H3L0 296 aaPredicted RBP13.89□□□□□ -0.19
USP49-203ENST00000394253 VTI1BQ9UEU0 232 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 KDM5DQ9BY66 1539 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 NOS1P29475 1434 aa13.89□□□□□ -0.19
USP49-203ENST00000394253 TKTP29401 623 aaKnown RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 STK4Q13043 487 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 LRRC41Q15345 812 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ARMC6Q6NXE6 501 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 GRPEL2Q8TAA5 225 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 APBB2Q92870 758 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 C9orf16Q9BUW7 83 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ELOVL6Q9H5J4 265 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 A0A087X0T9 212 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 HAT1O14929 419 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 GRK4P32298 578 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 TUBA1BP68363 451 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 TUBA1AQ71U36 451 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP49-203ENST00000394253 PROSER1Q86XN7 944 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 COLGALT2Q8IYK4 626 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 FICDQ9BVA6 458 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 OSBPL5Q9H0X9 879 aaPredicted RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 KLHL28Q9NXS3 571 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ALOX5P09917 674 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 POU1F1P28069 291 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SEL1L3Q68CR1 1132 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 CHPFQ8IZ52 775 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 TEX13BQ9BXU2 312 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 RAD54BQ9Y620 910 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 ATG7O95352 703 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 XRCC4Q13426 336 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 MAPK6Q16659 721 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 C1orf189Q5VU69 101 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ERAP2Q6P179 960 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SLC13A5Q86YT5 568 aaPredicted RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 POMGNT2Q8NAT1 580 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 GOLPH3Q9H4A6 298 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 CD248Q9HCU0 757 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 DOLKQ9UPQ8 538 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SERPINB5P36952 375 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 CTSWP56202 376 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SUN5Q8TC36 379 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SLCO1B7G3V0H7 640 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 FGAP02671 866 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 GRK3P35626 688 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ARPC4P59998 168 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 KCNH2Q12809 1159 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 IZUMO2Q6UXV1 221 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 KLHL23Q8NBE8 558 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 C1orf131Q8NDD1 294 aaKnown RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 RNF25Q96BH1 459 aaPredicted RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 C1QTNF1Q9BXJ1 281 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ZCWPW1Q9H0M4 648 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 EPB41L4AQ9HCS5 686 aaPredicted RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 METTL21EPA6NDL7 271 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 ATF4P18848 351 aaPredicted RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 HSD3B2P26439 372 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 GRIK1P39086 918 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 GEMIN4P57678 1058 aaKnown RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 ITGADQ13349 1161 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 C5orf22Q49AR2 442 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SLFN13Q68D06 897 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 TMEM26Q6ZUK4 368 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 SPAG16Q8N0X2 631 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 UTP15Q8TED0 518 aaKnown RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.88□□□□□ -0.19
USP49-203ENST00000394253 AMACRQ9UHK6 382 aa13.88□□□□□ -0.19
USP49-203ENST00000394253 ATP9BO43861 1147 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 UQCRBP14927 111 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 AP3M2P53677 418 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 CACNA2D1P54289 1103 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 TGM3Q08188 693 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms