RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 BST2Q10589 180 aaKnown RBP20.72■□□□□ 0.91
RAB5C-202ENST00000393860 TAF5Q15542 800 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 ZFYVE27Q5T4F4 411 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 SLC39A5Q6ZMH5 540 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 SLC13A5Q86YT5 568 aaPredicted RBP20.72■□□□□ 0.91
RAB5C-202ENST00000393860 SCUBE3Q8IX30 993 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 FUKQ8N0W3 1084 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 CLEC4CQ8WTT0 213 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 NAP1L3Q99457 506 aaPredicted RBP20.72■□□□□ 0.91
RAB5C-202ENST00000393860 HERPUD2Q9BSE4 406 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 MED10Q9BTT4 135 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 SLC4A5Q9BY07 1137 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 CRTAC1Q9NQ79 661 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 STIM2Q9P246 746 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 ESYT3A0FGR9 886 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 PI4K2BG5E9Z4 385 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 CCDC188H7C350 402 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 SART1O43290 800 aaKnown RBP20.71■□□□□ 0.91
RAB5C-202ENST00000393860 SETSIPP0DME0 302 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 LCP1P13796 627 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 AARSP49588 968 aaKnown RBP eCLIP20.71■□□□□ 0.91
RAB5C-202ENST00000393860 RABGGTBP53611 331 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 FAM189BP81408 668 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 PIGHQ14442 188 aaPredicted RBP20.71■□□□□ 0.91
RAB5C-202ENST00000393860 TRIM60Q495X7 471 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 PLEKHG4Q58EX7 1191 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 NOMO2Q5JPE7 1267 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 TRNP1Q6NT89 227 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 SYT15Q9BQS2 421 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 FTHL17Q9BXU8 183 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 SEZ6LQ9BYH1 1024 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 AMACRQ9UHK6 382 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 TET1Q8NFU7 2136 aa20.71■□□□□ 0.91
RAB5C-202ENST00000393860 GUCY2DQ02846 1103 aa20.7■□□□□ 0.91
RAB5C-202ENST00000393860 TMEM86AQ8N2M4 240 aa20.7■□□□□ 0.91
RAB5C-202ENST00000393860 ARFGAP1Q8N6T3 406 aa20.7■□□□□ 0.91
RAB5C-202ENST00000393860 RNF25Q96BH1 459 aaPredicted RBP20.7■□□□□ 0.91
RAB5C-202ENST00000393860 DNAI2Q9GZS0 605 aa20.7■□□□□ 0.91
RAB5C-202ENST00000393860 HIPK3Q9H422 1215 aa20.7■□□□□ 0.91
RAB5C-202ENST00000393860 ARFGAP3Q9NP61 516 aa20.7■□□□□ 0.91
RAB5C-202ENST00000393860 TANC1Q9C0D5 1861 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 MYBPHLA2RUH7 354 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 PITPNM1O00562 1244 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 ENPP3O14638 875 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 PAPSS1O43252 624 aaPredicted RBP20.7■□□□□ 0.9
RAB5C-202ENST00000393860 BEST1O76090 585 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 ODC1P11926 461 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 GLE1Q53GS7 698 aaKnown RBP20.7■□□□□ 0.9
RAB5C-202ENST00000393860 RAB6CQ53S08 254 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 OLFML1Q6UWY5 402 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 PAQR9Q6ZVX9 377 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 ANKS1BQ7Z6G8 1248 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 NIPA2Q8N8Q9 360 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 URGCPQ8TCY9 931 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 HEMGNQ9BXL5 484 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 RAB6CQ9H0N0 254 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 ZWILCHQ9H900 591 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 TBC1D13Q9NVG8 400 aa20.7■□□□□ 0.9
RAB5C-202ENST00000393860 GOLGA6L10A0A0M3HER8 536 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 INPPL1O15357 1258 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 KRT1P04264 644 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 CYP2C18P33260 490 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 FLT3P36888 993 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 LHX1P48742 406 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 TLE2Q04725 743 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 FAAP100Q0VG06 881 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 SH3PXD2AQ5TCZ1 1133 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 TMEM110Q86TL2 294 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 KATNAL2Q8IYT4 538 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 PRELID2Q8N945 189 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 UBE2Q2Q8WVN8 375 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 RXFP2Q8WXD0 754 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 SEPT8Q92599 483 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 UROC1Q96N76 676 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 HNRNPABQ99729 332 aaKnown RBP20.69■□□□□ 0.9
RAB5C-202ENST00000393860 RTP3Q9BQQ7 232 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 EPB41L5Q9HCM4 733 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 DNAJB4Q9UDY4 337 aa20.69■□□□□ 0.9
RAB5C-202ENST00000393860 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.69■□□□□ 0.9
RAB5C-202ENST00000393860 TTI1O43156 1089 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 LRCH4O75427 683 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 ERLIN1O75477 346 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 RARAP10276 462 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 RNASELQ05823 741 aaKnown RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 SIX1Q15475 284 aaPredicted RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 TRADDQ15628 312 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 C15orf59Q2T9L4 293 aaPredicted RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 SMTNL2Q2TAL5 461 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 DEFB128Q7Z7B8 93 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 RSPH1Q8WYR4 309 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 CRISPLD2Q9H0B8 497 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 KRT82Q9NSB4 513 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 TMEM161AQ9NX61 479 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 ZRANB2O95218 330 aaKnown RBP eCLIP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 RALAP11233 206 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 GPD1P21695 349 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 OR1G1P47890 313 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 SLC6A3Q01959 620 aa20.68■□□□□ 0.9
RAB5C-202ENST00000393860 SMC1AQ14683 1233 aaKnown RBP20.68■□□□□ 0.9
RAB5C-202ENST00000393860 CDO1Q16878 200 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms