RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 GAB4Q2WGN9 574 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 SPATA18Q8TC71 538 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 SH3RF2Q8TEC5 729 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 FAM213AQ9BRX8 229 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 TPSD1Q9BZJ3 242 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 GDAP2Q9NXN4 497 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 SIX4Q9UIU6 781 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 GTF3C4Q9UKN8 822 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 AGAP1Q9UPQ3 857 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 ITPR1Q14643 2758 aa16.5■□□□□ 0.23
CHMP3-202ENST00000393773 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ANTXRLA6NF34 631 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 C4orf47A7E2U8 309 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 C1QTNF9BB2RNN3 333 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 GABRDO14764 452 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 HUS1O60921 280 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 CAVIN2O95810 425 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 BMP15O95972 392 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 C1QTNF9P0C862 333 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 BCKDHBP21953 392 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 OPRD1P41143 372 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 DGKEP52429 567 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ZXDBP98169 803 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 MYL7Q01449 175 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ZNF252P-AS1Q0IIN9 211 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 POSTNQ15063 836 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 C8orf34Q49A92 452 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
CHMP3-202ENST00000393773 USP49Q70CQ1 688 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 DYMQ7RTS9 669 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ADGRF2Q8IZF7 708 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ARL14EPQ8N8R7 260 aaPredicted RBP16.49■□□□□ 0.23
CHMP3-202ENST00000393773 KRI1Q8N9T8 703 aaKnown RBP16.49■□□□□ 0.23
CHMP3-202ENST00000393773 TTC16Q8NEE8 873 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 TSTD1Q8NFU3 115 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 USP33Q8TEY7 942 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 FUBP3Q96I24 572 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHMP3-202ENST00000393773 TMX3Q96JJ7 454 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 TMEM121BQ9BXQ6 578 aaPredicted RBP16.49■□□□□ 0.23
CHMP3-202ENST00000393773 RBAKQ9NYW8 714 aaPredicted RBP16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ITGA11Q9UKX5 1188 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ARHGAP26Q9UNA1 814 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 FREM2Q5SZK8 3169 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 PCDH15Q96QU1 1955 aa16.49■□□□□ 0.23
CHMP3-202ENST00000393773 ATRXP46100 2492 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 K7EQS6 105 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 GBP1P32455 592 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 DDIT3P35638 169 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 MAGEA11P43364 429 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 CASP5P51878 434 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 PSMD2Q13200 908 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 KCNB1Q14721 858 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 RABEP1Q15276 862 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 UNQ6494/PRO21346Q6UXR6 183 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 LIMS2Q7Z4I7 341 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 TOP6BLQ8N6T0 577 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 MDGA1Q8NFP4 955 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 DNAJC19Q96DA6 116 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 CNOT6LQ96LI5 555 aaKnown RBP16.48■□□□□ 0.23
CHMP3-202ENST00000393773 MTMR12Q9C0I1 747 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 LINC00597Q9H2U6 94 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 SEL1LQ9UBV2 794 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 STK17AQ9UEE5 414 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 INVSQ9Y283 1065 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 SNX9Q9Y5X1 595 aa16.48■□□□□ 0.23
CHMP3-202ENST00000393773 PTPRJQ12913 1337 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 PATE3B3GLJ2 98 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 NFATC1O95644 943 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 GARTP22102 1010 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 PCSK1P29120 753 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 SEC13P55735 322 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 SF3A1Q15459 793 aaKnown RBP16.47■□□□□ 0.23
CHMP3-202ENST00000393773 SOWAHAQ2M3V2 549 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 SH3PXD2AQ5TCZ1 1133 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 ANO7Q6IWH7 933 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 FAM171BQ6P995 826 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 CYP2U1Q7Z449 544 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 C11orf74Q86VG3 221 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 SPATA2LQ8IUW3 424 aaPredicted RBP16.47■□□□□ 0.23
CHMP3-202ENST00000393773 EPSTI1Q96J88 318 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 FGFBP2Q9BYJ0 223 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 MRPL44Q9H9J2 332 aaKnown RBP16.47■□□□□ 0.23
CHMP3-202ENST00000393773 MMP17Q9ULZ9 603 aa16.47■□□□□ 0.23
CHMP3-202ENST00000393773 CACNA1EQ15878 2313 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 MYMKA6NI61 221 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 CDX4O14627 284 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-202ENST00000393773 CYP17A1P05093 508 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 HNRNPLP14866 589 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHMP3-202ENST00000393773 LHX1P48742 406 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 USP46P62068 366 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
CHMP3-202ENST00000393773 FOXC1Q12948 553 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 USP39Q53GS9 565 aaKnown RBP16.46■□□□□ 0.23
CHMP3-202ENST00000393773 C2orf27AQ580R0 203 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 SCN4BQ8IWT1 228 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 CSGALNACT2Q8N6G5 542 aa16.46■□□□□ 0.23
CHMP3-202ENST00000393773 FSIP1Q8NA03 581 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms