RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 SRPK1Q96SB4 655 aaKnown RBP17.11■□□□□ 0.33
PHTF1-205ENST00000393357 IFT122Q9HBG6 1241 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 SAR1AQ9NR31 198 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 PDP2Q9P2J9 529 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 GSTA2P09210 222 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 DLDP09622 509 aaKnown RBP17.11■□□□□ 0.33
PHTF1-205ENST00000393357 FAM200BP0CF97 657 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 RARBP10826 455 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 ITGB5P18084 799 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 RARRES1P49788 294 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 GALK1P51570 392 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 STAT2P52630 851 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 GK3PQ14409 553 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 OGFOD1Q8N543 542 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 TTC25Q96NG3 672 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 GLT8D2Q9H1C3 349 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 LIN28AQ9H9Z2 209 aaKnown RBP17.11■□□□□ 0.33
PHTF1-205ENST00000393357 TELO2Q9Y4R8 837 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 KCNA4P22459 653 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 SLC1A1P43005 524 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 CENPCQ03188 943 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 HPS6Q86YV9 775 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 C20orf27Q9GZN8 174 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 TMOD2Q9NZR1 351 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 HEY1Q9Y5J3 304 aa17.11■□□□□ 0.33
PHTF1-205ENST00000393357 ARAP2Q8WZ64 1704 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 MAGEB2O15479 319 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 GRAP2O75791 330 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 CYTH1Q15438 398 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 PTAR1Q7Z6K3 402 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-205ENST00000393357 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.1■□□□□ 0.33
PHTF1-205ENST00000393357 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 MTO1Q9Y2Z2 717 aaKnown RBP17.1■□□□□ 0.33
PHTF1-205ENST00000393357 ACTL7BQ9Y614 415 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 MYPNQ86TC9 1320 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 HLA-DRAP01903 254 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 HNRNPCP07910 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
PHTF1-205ENST00000393357 POTEJP0CG39 1038 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 CRKP46108 304 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
PHTF1-205ENST00000393357 DNAJC24Q6P3W2 148 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 CASC4Q6P4E1 433 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 SPOCD1Q6ZMY3 1216 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-205ENST00000393357 GDPD5Q8WTR4 605 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 CPT1BQ92523 772 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 SLITRK1Q96PX8 696 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 KLHL4Q9C0H6 718 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 DMAP1Q9NPF5 467 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-205ENST00000393357 SEL1LQ9UBV2 794 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 ITGB4P16144 1822 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 DLEC1Q9Y238 1755 aa17.1■□□□□ 0.33
PHTF1-205ENST00000393357 ZNF862O60290 1169 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 ATP2B4P23634 1241 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 OGDHQ02218 1023 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 DYNC1I2Q13409 638 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 RNASEH2BQ5TBB1 312 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 MARK2Q7KZI7 788 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 CRYGNQ8WXF5 182 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 ZNF212Q9UDV6 495 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 UNGP13051 313 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 HOXA7P31268 230 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 RPL22P35268 128 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 NPTX2P47972 431 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 RPL10AP62906 217 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 ALLCQ8N6M5 410 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 BANPQ8N9N5 519 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 PGBD4Q96DM1 585 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 TRAPPC9Q96Q05 1148 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 CSRNP1Q96S65 589 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 WDR83Q9BRX9 315 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 PHACTR1Q9C0D0 580 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 TMEM8AQ9HCN3 771 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 CENPFP49454 3210 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 TCRBV9S1A1TA0A576 114 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 CXorf49A8MYA2 514 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 ALOX15BO15296 676 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 TCEA3O75764 348 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 VAV1P15498 845 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 GTF2H1P32780 548 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 CRADDP78560 199 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 SPP2Q13103 211 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 HIC1Q14526 733 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 PSMD6Q15008 389 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 ZC3H12AQ5D1E8 599 aaKnown RBP17.09■□□□□ 0.33
PHTF1-205ENST00000393357 UNC5BQ8IZJ1 945 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 OR6Y1Q8NGX8 325 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 IFT43Q96FT9 208 aa17.09■□□□□ 0.33
PHTF1-205ENST00000393357 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms