RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 PON2Q15165 354 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 PDGFRLQ15198 375 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 MAPRE1Q15691 268 aaKnown RBP13.23□□□□□ -0.29
CTSC-202ENST00000393301 ZNF77Q15935 545 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 TAF12Q16514 161 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 BMT2Q1RMZ1 405 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 SCARA3Q6AZY7 606 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 WDR49Q8IV35 697 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 C12orf56Q8IXR9 622 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 SYCP3Q8IZU3 236 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 CSGALNACT2Q8N6G5 542 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 SPATA20Q8TB22 786 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 RTKNQ9BST9 563 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 PI4K2AQ9BTU6 479 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 TTLL2Q9BWV7 592 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 GKN1Q9NS71 199 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 GCNT4Q9P109 453 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 CDH9Q9ULB4 789 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 RAB23Q9ULC3 237 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 SNX9Q9Y5X1 595 aa13.23□□□□□ -0.29
CTSC-202ENST00000393301 GOLGA6L4A6NEF3 574 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 OTOL1A6NHN0 477 aaPredicted RBP13.22□□□□□ -0.29
CTSC-202ENST00000393301 TGFB1I1O43294 461 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 HRO43593 1189 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 TACC1O75410 805 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 AKAP3O75969 853 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 ZNF202O95125 648 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 CYP2F1P24903 491 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 GPR15P49685 360 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 NDUFA8P51970 172 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 AMPD2Q01433 879 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 BFSP1Q12934 665 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 MYO1EQ12965 1108 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 FBXO43Q4G163 708 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 TXNDC8Q6A555 127 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 CEP57L1Q8IYX8 460 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 GLIS3Q8NEA6 775 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 OR5B17Q8NGF7 314 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 LOXL4Q96JB6 756 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 GBP4Q96PP9 640 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 C2orf42Q9NWW7 574 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 HSPBP1Q9NZL4 362 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
CTSC-202ENST00000393301 GTF3C4Q9UKN8 822 aa13.22□□□□□ -0.29
CTSC-202ENST00000393301 GOLGA8IPA6NC78 632 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 GOLGA8JA6NMD2 632 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 ATG13O75143 517 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 OLFM2O95897 454 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 TNNC2P02585 160 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 DRD1P21728 446 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 FNTBP49356 437 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 PDE6CP51160 858 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 ATXN1P54253 815 aaKnown RBP13.21□□□□□ -0.29
CTSC-202ENST00000393301 DMWDQ09019 674 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 PSMD2Q13200 908 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 MTF1Q14872 753 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 PSMD6Q15008 389 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 CSRP2Q16527 193 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 DDR2Q16832 855 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 FOXD4L6Q3SYB3 417 aaPredicted RBP13.21□□□□□ -0.29
CTSC-202ENST00000393301 COBLL1Q53SF7 1204 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 FOXD4L3Q6VB84 417 aaPredicted RBP13.21□□□□□ -0.29
CTSC-202ENST00000393301 KRBA2Q6ZNG9 492 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 UNC13DQ70J99 1090 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 FSIP1Q8NA03 581 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 NETO1Q8TDF5 533 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 OSCP1Q8WVF1 389 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 EXOC4Q96A65 974 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 HPDLQ96IR7 371 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 SYT15Q9BQS2 421 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 SMG9Q9H0W8 520 aaKnown RBP13.21□□□□□ -0.29
CTSC-202ENST00000393301 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.29
CTSC-202ENST00000393301 PCIF1Q9H4Z3 704 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 VRTNQ9H8Y1 702 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 CRTAC1Q9NQ79 661 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 AGPAT3Q9NRZ7 376 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
CTSC-202ENST00000393301 CEP295Q9C0D2 2601 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 A0A1B0GVL5 298 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 SLC30A4O14863 429 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 USP17L7P0C7H9 530 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 ACAT1P24752 427 aaKnown RBP13.2□□□□□ -0.3
CTSC-202ENST00000393301 PPP3CCP48454 512 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 NOP14P78316 857 aaKnown RBP13.2□□□□□ -0.3
CTSC-202ENST00000393301 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTSC-202ENST00000393301 SIM2Q14190 667 aaPredicted RBP13.2□□□□□ -0.3
CTSC-202ENST00000393301 KCNB1Q14721 858 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 SNRNP35Q16560 246 aaKnown RBP13.2□□□□□ -0.3
CTSC-202ENST00000393301 CCDC142Q17RM4 750 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 EML3Q32P44 896 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 PKN3Q6P5Z2 889 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 TRAPPC11Q7Z392 1133 aa13.2□□□□□ -0.3
CTSC-202ENST00000393301 SPATA2LQ8IUW3 424 aaPredicted RBP13.2□□□□□ -0.3
CTSC-202ENST00000393301 CAMKK1Q8N5S9 505 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms