RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 DEFB124Q8NES8 71 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 TTC8Q8TAM2 541 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 TCEAL3Q969E4 200 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 ZSWIM3Q96MP5 696 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 TCF12Q99081 682 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 CCDC94Q9BW85 323 aaPredicted RBP8.6□□□□□ -1.03
CASP4-201ENST00000393150 SLC26A6Q9BXS9 759 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 RNF26Q9BY78 433 aaPredicted RBP8.6□□□□□ -1.03
CASP4-201ENST00000393150 BACH2Q9BYV9 841 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 ATXN3LQ9H3M9 355 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 C12orf49Q9H741 205 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 PCDHA4Q9UN74 947 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 SLC6A14Q9UN76 642 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 GDAQ9Y2T3 454 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 ASB3Q9Y575 518 aa8.6□□□□□ -1.03
CASP4-201ENST00000393150 LNP1A1A4G5 178 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 CPLX1O14810 134 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 TBX3O15119 743 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 ALDH1A2O94788 518 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 CDC27P30260 824 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 CLCNKBP51801 687 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 ATP11AP98196 1134 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 CAPSQ13938 189 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 PPP2R5AQ15172 486 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 UPP1Q16831 310 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 C19orf48Q6RUI8 117 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 ADAMTSL4Q6UY14 1074 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 CDR2LQ86X02 465 aaPredicted RBP8.59□□□□□ -1.03
CASP4-201ENST00000393150 PROSER1Q86XN7 944 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 BLIDQ8IZY5 108 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 FAM177A1Q8N128 213 aaPredicted RBP8.59□□□□□ -1.03
CASP4-201ENST00000393150 MCPH1Q8NEM0 835 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 DEPTORQ8TB45 409 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 BPIFB1Q8TDL5 484 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 SPACA7Q96KW9 195 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 NACC1Q96RE7 527 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 POLR3FQ9H1D9 316 aaPredicted RBP8.59□□□□□ -1.03
CASP4-201ENST00000393150 DUSP15Q9H1R2 295 aaPredicted RBP8.59□□□□□ -1.03
CASP4-201ENST00000393150 CCDC86Q9H6F5 360 aaKnown RBP8.59□□□□□ -1.03
CASP4-201ENST00000393150 ANKEF1Q9NU02 776 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 GTSE1Q9NYZ3 720 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 VPS54Q9P1Q0 977 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 CACNG4Q9UBN1 327 aa8.59□□□□□ -1.03
CASP4-201ENST00000393150 DSPP15924 2871 aaKnown RBP8.59□□□□□ -1.03
CASP4-201ENST00000393150 B4GALT5O43286 388 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 CCNT1O60563 726 aaKnown RBP8.58□□□□□ -1.04
CASP4-201ENST00000393150 GADD45BO75293 160 aaPredicted RBP8.58□□□□□ -1.04
CASP4-201ENST00000393150 TDP2O95551 362 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 PRKCBP05771 671 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 GJA1P17302 382 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 RPL9P32969 192 aaKnown RBP8.58□□□□□ -1.04
CASP4-201ENST00000393150 ARL2P36404 184 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 GMPRP36959 345 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 DHPSP49366 369 aaPredicted RBP8.58□□□□□ -1.04
CASP4-201ENST00000393150 MCM2P49736 904 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 EPHA5P54756 1037 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 SSRP1Q08945 709 aaKnown RBP8.58□□□□□ -1.04
CASP4-201ENST00000393150 BFSP1Q12934 665 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 CTTNQ14247 550 aaKnown RBP8.58□□□□□ -1.04
CASP4-201ENST00000393150 VEPH1Q14D04 833 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 FAM187BQ17R55 369 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 SOWAHCQ53LP3 525 aaPredicted RBP8.58□□□□□ -1.04
CASP4-201ENST00000393150 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 GPR158Q5T848 1215 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 ARMCX5Q6P1M9 558 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 B3GNT9Q6UX72 402 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 SLCO4C1Q6ZQN7 724 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 LPCAT2Q7L5N7 544 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 RABEPKQ7Z6M1 372 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 CCNJLQ8IV13 435 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 NOSTRINQ8IVI9 506 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 TSTD1Q8NFU3 115 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 PIGKQ92643 395 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 IFT74Q96LB3 600 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 DRC1Q96MC2 740 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 KIF2CQ99661 725 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 RASSF4Q9H2L5 321 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 EBF1Q9UH73 591 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 ZZEF1O43149 2961 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 COL4A3Q01955 1670 aa8.58□□□□□ -1.04
CASP4-201ENST00000393150 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
CASP4-201ENST00000393150 ELOA3DA6NLF2 546 aaPredicted RBP8.57□□□□□ -1.04
CASP4-201ENST00000393150 I3L4J1 428 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 ARNTLO00327 626 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 PODXLO00592 558 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 PTGESO14684 152 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 WIPF1O43516 503 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 XRCC6P12956 609 aaKnown RBP eCLIP8.57□□□□□ -1.04
CASP4-201ENST00000393150 GSPT1P15170 499 aaKnown RBP8.57□□□□□ -1.04
CASP4-201ENST00000393150 ATP2B1P20020 1258 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 GLRA2P23416 452 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 CDC25CP30307 473 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 MCM4P33991 863 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 AVPR1AP37288 418 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 CCR2P41597 374 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 EFNA5P52803 228 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 NECTIN1Q15223 517 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 PCSK7Q16549 785 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 ELOA3BQ3SY89 546 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms