RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 MORF4L2Q15014 288 aa15.02■□□□□ -0
MKS1-203ENST00000393120 KYNUQ16719 465 aa15.02■□□□□ -0
MKS1-203ENST00000393120 PKDCCQ504Y2 493 aa15.02■□□□□ -0
MKS1-203ENST00000393120 UNC93AQ86WB7 457 aa15.02■□□□□ -0
MKS1-203ENST00000393120 EMC1Q8N766 993 aa15.02■□□□□ -0
MKS1-203ENST00000393120 BEST2Q8NFU1 509 aa15.02■□□□□ -0
MKS1-203ENST00000393120 UHMK1Q8TAS1 419 aaKnown RBP15.02■□□□□ -0
MKS1-203ENST00000393120 ZMAT2Q96NC0 199 aaKnown RBP15.02■□□□□ -0
MKS1-203ENST00000393120 XPO6Q96QU8 1125 aaKnown RBP15.02■□□□□ -0
MKS1-203ENST00000393120 FAM49AQ9H0Q0 323 aaPredicted RBP15.02■□□□□ -0
MKS1-203ENST00000393120 RABEP2Q9H5N1 569 aa15.02■□□□□ -0
MKS1-203ENST00000393120 ZWILCHQ9H900 591 aa15.02■□□□□ -0
MKS1-203ENST00000393120 PPANQ9NQ55 473 aaKnown RBP15.02■□□□□ -0
MKS1-203ENST00000393120 SNTG2Q9NY99 539 aa15.02■□□□□ -0
MKS1-203ENST00000393120 TSPAN16Q9UKR8 245 aa15.02■□□□□ -0
MKS1-203ENST00000393120 Q9Y3F1 56 aa15.02■□□□□ -0
MKS1-203ENST00000393120 C5orf60A6NFR6 353 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 C2CD4BA6NLJ0 364 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 MYO1CO00159 1063 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 ENDOD1O94919 500 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 ZNF865P0CJ78 1059 aaPredicted RBP15.02□□□□□ -0.01
MKS1-203ENST00000393120 CYP2C9P11712 490 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 MIPP30301 263 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 UBA3Q8TBC4 463 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 STK32AQ8WU08 396 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 ACSF2Q96CM8 615 aaPredicted RBP15.02□□□□□ -0.01
MKS1-203ENST00000393120 SLC4A5Q9BY07 1137 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 CCDC134Q9H6E4 229 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 CDHR5Q9HBB8 845 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 USP18Q9UMW8 372 aa15.02□□□□□ -0.01
MKS1-203ENST00000393120 DPYSL4O14531 572 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 CST8O60676 142 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 CAPN15O75808 1086 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 GPD1P21695 349 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 SNX16P57768 344 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 MFSD10Q14728 455 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 STAT4Q14765 748 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 FAM102AQ5T9C2 384 aaPredicted RBP15.01□□□□□ -0.01
MKS1-203ENST00000393120 ARHGAP17Q68EM7 881 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 MICALCLQ6ZW33 695 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 PCGF5Q86SE9 256 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 TMEM110Q86TL2 294 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 GLIS1Q8NBF1 620 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 KCTD6Q8NC69 237 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 USP6NLQ92738 828 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 TTC25Q96NG3 672 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 RBM15Q96T37 977 aaKnown RBP eCLIP15.01□□□□□ -0.01
MKS1-203ENST00000393120 CCDC77Q9BR77 488 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 EIF2AQ9BY44 585 aaKnown RBP15.01□□□□□ -0.01
MKS1-203ENST00000393120 PHACTR1Q9C0D0 580 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 RSAD1Q9HA92 442 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 LGALS13Q9UHV8 139 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 SHOC2Q9UQ13 582 aa15.01□□□□□ -0.01
MKS1-203ENST00000393120 SMIM23A6NLE4 172 aa15□□□□□ -0.01
MKS1-203ENST00000393120 CD4P01730 458 aa15□□□□□ -0.01
MKS1-203ENST00000393120 CHN1P15882 459 aa15□□□□□ -0.01
MKS1-203ENST00000393120 MAGEA4P43358 317 aa15□□□□□ -0.01
MKS1-203ENST00000393120 SLCO1A2P46721 670 aa15□□□□□ -0.01
MKS1-203ENST00000393120 GPS1Q13098 491 aa15□□□□□ -0.01
MKS1-203ENST00000393120 LONRF1Q17RB8 773 aa15□□□□□ -0.01
MKS1-203ENST00000393120 XKR4Q5GH76 650 aa15□□□□□ -0.01
MKS1-203ENST00000393120 PRAMEF19Q5SWL8 479 aa15□□□□□ -0.01
MKS1-203ENST00000393120 RNASEH2BQ5TBB1 312 aaKnown RBP15□□□□□ -0.01
MKS1-203ENST00000393120 YTHDF3Q7Z739 585 aaKnown RBP15□□□□□ -0.01
MKS1-203ENST00000393120 TLK2Q86UE8 772 aa15□□□□□ -0.01
MKS1-203ENST00000393120 EXOC3L1Q86VI1 746 aa15□□□□□ -0.01
MKS1-203ENST00000393120 MDM1Q8TC05 714 aa15□□□□□ -0.01
MKS1-203ENST00000393120 ACTL9Q8TC94 416 aa15□□□□□ -0.01
MKS1-203ENST00000393120 OSMRQ99650 979 aa15□□□□□ -0.01
MKS1-203ENST00000393120 CPA4Q9UI42 421 aa15□□□□□ -0.01
MKS1-203ENST00000393120 UBQLN1Q9UMX0 589 aaKnown RBP15□□□□□ -0.01
MKS1-203ENST00000393120 SNX9Q9Y5X1 595 aa15□□□□□ -0.01
MKS1-203ENST00000393120 FAM169AQ9Y6X4 670 aa15□□□□□ -0.01
MKS1-203ENST00000393120 E5RJQ4 531 aa15□□□□□ -0.01
MKS1-203ENST00000393120 APOC4-APOC2K7ER74 178 aa15□□□□□ -0.01
MKS1-203ENST00000393120 SMAPO00193 183 aa15□□□□□ -0.01
MKS1-203ENST00000393120 APOC2P02655 101 aa15□□□□□ -0.01
MKS1-203ENST00000393120 ZSCAN5DPP0CG00 497 aa15□□□□□ -0.01
MKS1-203ENST00000393120 PSEN2P49810 448 aa15□□□□□ -0.01
MKS1-203ENST00000393120 OTUD4Q01804 1114 aaKnown RBP15□□□□□ -0.01
MKS1-203ENST00000393120 PLCB3Q01970 1234 aa15□□□□□ -0.01
MKS1-203ENST00000393120 TMEM62Q0P6H9 643 aa15□□□□□ -0.01
MKS1-203ENST00000393120 SMTNL2Q2TAL5 461 aa15□□□□□ -0.01
MKS1-203ENST00000393120 GOLGA7BQ2TAP0 167 aa15□□□□□ -0.01
MKS1-203ENST00000393120 KCNT1Q5JUK3 1230 aa15□□□□□ -0.01
MKS1-203ENST00000393120 C9orf57Q5W0N0 161 aa15□□□□□ -0.01
MKS1-203ENST00000393120 OLFML2BQ68BL8 750 aa15□□□□□ -0.01
MKS1-203ENST00000393120 FAM183BPQ6ZVS7 135 aa15□□□□□ -0.01
MKS1-203ENST00000393120 PRUNE1Q86TP1 453 aa15□□□□□ -0.01
MKS1-203ENST00000393120 ZDHHC17Q8IUH5 632 aa15□□□□□ -0.01
MKS1-203ENST00000393120 NME8Q8N427 588 aa15□□□□□ -0.01
MKS1-203ENST00000393120 SLC35F5Q8WV83 523 aa15□□□□□ -0.01
MKS1-203ENST00000393120 ATXN2LQ8WWM7 1075 aaKnown RBP15□□□□□ -0.01
MKS1-203ENST00000393120 RXFP2Q8WXD0 754 aa15□□□□□ -0.01
MKS1-203ENST00000393120 PWWP2AQ96N64 755 aa15□□□□□ -0.01
MKS1-203ENST00000393120 NCAPGQ9BPX3 1015 aa15□□□□□ -0.01
MKS1-203ENST00000393120 MRPL45Q9BRJ2 306 aaKnown RBP15□□□□□ -0.01
MKS1-203ENST00000393120 TMEM121Q9BTD3 319 aa15□□□□□ -0.01
MKS1-203ENST00000393120 CXCL16Q9H2A7 254 aa15□□□□□ -0.01
MKS1-203ENST00000393120 SGK1O00141 431 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms