RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 VCX3AQ9NNX9 186 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 STARD7Q9NQZ5 370 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 DSEQ9UL01 958 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 LRRC10BA6NIK2 292 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 EIF3HO15372 352 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCN3B-202ENST00000392770 IQSEC1Q6DN90 963 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 LRRC55Q6ZSA7 311 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 SLFN11Q7Z7L1 901 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 PDZD8Q8NEN9 1154 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 SMYD3Q9H7B4 428 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 ARHGEF38Q9NXL2 777 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 AFF4Q9UHB7 1163 aaKnown RBP17.28■□□□□ 0.36
SCN3B-202ENST00000392770 MAP3K6O95382 1288 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 POLBP06746 335 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 ADRB2P07550 413 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 OTUD4Q01804 1114 aaKnown RBP17.28■□□□□ 0.36
SCN3B-202ENST00000392770 UGCGQ16739 394 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 EXD1Q8NHP7 514 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 SLITRK1Q96PX8 696 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 LRRC37A3O60309 1634 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 FAM47DPA6NHR8 397 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 ATP6V0D2Q8N8Y2 350 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 ZNF606Q8WXB4 792 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
SCN3B-202ENST00000392770 HADHAP40939 763 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 ARL8AQ96BM9 186 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 SUDS3Q9H7L9 328 aaPredicted RBP17.27■□□□□ 0.36
SCN3B-202ENST00000392770 KDM3BQ7LBC6 1761 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 ITGB5P18084 799 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 GEMIN4P57678 1058 aaKnown RBP17.27■□□□□ 0.36
SCN3B-202ENST00000392770 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
SCN3B-202ENST00000392770 HIPK4Q8NE63 616 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 XPO6Q96QU8 1125 aaKnown RBP17.27■□□□□ 0.36
SCN3B-202ENST00000392770 TSPAN16Q9UKR8 245 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 VAV3Q9UKW4 847 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 SH3BP1Q9Y3L3 701 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 E2F8A0AVK6 867 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 SPATA31C2B4DYI2 1134 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 ALDH1A1P00352 501 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 STIP1P31948 543 aaKnown RBP17.27■□□□□ 0.36
SCN3B-202ENST00000392770 BEX3Q00994 111 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 PPP3CAQ08209 521 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 BFSP2Q13515 415 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 IMPG1Q17R60 797 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 ARRDC4Q8NCT1 418 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 RXFP2Q8WXD0 754 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 TRIM15Q9C019 465 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 EML4Q9HC35 981 aaKnown RBP17.27■□□□□ 0.36
SCN3B-202ENST00000392770 DDX43Q9NXZ2 648 aaKnown RBP17.27■□□□□ 0.36
SCN3B-202ENST00000392770 WHRNQ9P202 907 aa17.27■□□□□ 0.36
SCN3B-202ENST00000392770 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 ATP9AO75110 1047 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 FDFT1P37268 417 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.35
SCN3B-202ENST00000392770 KLRG1Q96E93 195 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 HAUS8Q9BT25 410 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 USP10Q14694 798 aaKnown RBP17.27■□□□□ 0.35
SCN3B-202ENST00000392770 SH3BP5LQ7L8J4 393 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 CNPY3Q9BT09 278 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 ASB7Q9H672 318 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 OLA1Q9NTK5 396 aaKnown RBP17.27■□□□□ 0.35
SCN3B-202ENST00000392770 BAZ2BQ9UIF8 2168 aaKnown RBP17.27■□□□□ 0.35
SCN3B-202ENST00000392770 SPEF2Q9C093 1822 aa17.27■□□□□ 0.35
SCN3B-202ENST00000392770 TMEM120BA0PK00 339 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 MTSS1O43312 755 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 DDX53Q86TM3 631 aaKnown RBP17.26■□□□□ 0.35
SCN3B-202ENST00000392770 RIBC1Q8N443 379 aaPredicted RBP17.26■□□□□ 0.35
SCN3B-202ENST00000392770 GGT7Q9UJ14 662 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 NID2Q14112 1375 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 POMCP01189 267 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 AXLP30530 894 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 ULK4Q96C45 1275 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 KLF6Q99612 283 aaPredicted RBP17.26■□□□□ 0.35
SCN3B-202ENST00000392770 FBXO21O94952 628 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 PTGER2P43116 358 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 TSSK1BQ9BXA7 367 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 DRC3Q9H069 523 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 AP4E1Q9UPM8 1137 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 PDAP1Q13442 181 aaKnown RBP17.26■□□□□ 0.35
SCN3B-202ENST00000392770 YAF2Q8IY57 180 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 ANKZF1Q9H8Y5 726 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 KIF3CO14782 793 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 CTXN3Q4LDR2 81 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 HSD17B14Q9BPX1 270 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 XPNPEP3Q9NQH7 507 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 TIMM13Q9Y5L4 95 aaPredicted RBP17.26■□□□□ 0.35
SCN3B-202ENST00000392770 MROH7Q68CQ1 1323 aa17.26■□□□□ 0.35
SCN3B-202ENST00000392770 PJA2O43164 708 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 DNAJC6O75061 913 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 PPP1R36Q96LQ0 422 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 TMEM121Q9BTD3 319 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 MAGEA9P43362 315 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 KCNMA1Q12791 1236 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 ITGB3BPQ13352 177 aaPredicted RBP17.25■□□□□ 0.35
SCN3B-202ENST00000392770 TAF11Q15544 211 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 DDIASQ8IXT1 998 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 NPHS2Q9NP85 383 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 TLR2O60603 784 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 MAFO75444 373 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms