RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ITGB3P05106 788 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 CD48P09326 243 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 IQCF3P0C7M6 154 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 STAG3L1P0CL83 205 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 GABRB2P47870 512 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 ARL4CP56559 192 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 GPX6P59796 221 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 TNFAIP2Q03169 654 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 BNIP1Q12981 228 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 ACVR2BQ13705 512 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 SPARCL1Q14515 664 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 KCTD2Q14681 263 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 ANKRD22Q5VYY1 191 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 FAM228AQ86W67 206 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 RFX6Q8HWS3 928 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 ANKMY2Q8IV38 441 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 TMEM130Q8N3G9 435 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 MAGEC3Q8TD91 643 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 RSAD2Q8WXG1 361 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 TMEM176AQ96HP8 235 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 PAIP2Q9BPZ3 127 aaKnown RBP12.91□□□□□ -0.34
RFC5-201ENST00000392542 PITPNM3Q9BZ71 974 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 C10orf88Q9H8K7 445 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 ECT2Q9H8V3 914 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 RXFP1Q9HBX9 757 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 CLUHO75153 1309 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 CXCL11O14625 94 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 BANF1O75531 89 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 C22orf31O95567 290 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 TXNP10599 105 aaKnown RBP12.91□□□□□ -0.34
RFC5-201ENST00000392542 MCF2P10911 925 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 MIPP30301 263 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 ATICP31939 592 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 PHBP35232 272 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 RPL22P35268 128 aaKnown RBP12.91□□□□□ -0.34
RFC5-201ENST00000392542 PHKA2P46019 1235 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
RFC5-201ENST00000392542 ACAP1Q15027 740 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 FAM187BQ17R55 369 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 CMASQ8NFW8 434 aaPredicted RBP12.91□□□□□ -0.34
RFC5-201ENST00000392542 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 VRTNQ9H8Y1 702 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 KIF9Q9HAQ2 790 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 CYP3A43Q9HB55 503 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 KLHL14Q9P2G3 628 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 RBPJLQ9UBG7 517 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 FETUBQ9UGM5 382 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 PCSK1NQ9UHG2 260 aa12.91□□□□□ -0.34
RFC5-201ENST00000392542 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.91□□□□□ -0.34
RFC5-201ENST00000392542 E7ESA3 106 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 APOC4-APOC2K7ER74 178 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 M0QYV0 167 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 TRUB2O95900 331 aaKnown RBP12.9□□□□□ -0.34
RFC5-201ENST00000392542 APOC2P02655 101 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 GAD2Q05329 585 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 POU5F1BQ06416 359 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 Q3C1V9 767 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 RGS9BPQ6ZS82 235 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 TBC1D1Q86TI0 1168 aaPredicted RBP12.9□□□□□ -0.34
RFC5-201ENST00000392542 ERO1BQ86YB8 467 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 FITM2Q8N6M3 262 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 PYROXD1Q8WU10 500 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 RMDN2Q96LZ7 410 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 IFT122Q9HBG6 1241 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 RABGEF1Q9UJ41 708 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
RFC5-201ENST00000392542 SMAPO00193 183 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 RNF8O76064 485 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ATP6V1G2O95670 118 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 VDRP11473 427 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 NQO1P15559 274 aaKnown RBP12.9□□□□□ -0.34
RFC5-201ENST00000392542 GPD2P43304 727 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
RFC5-201ENST00000392542 MGAT5Q09328 741 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 TTLL4Q14679 1199 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 AMHR2Q16671 573 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ZNF484Q5JVG2 852 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 FNBP1LQ5T0N5 605 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 FAM47EQ6ZV65 393 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 UNC45BQ8IWX7 931 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ADPGKQ9BRR6 497 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ASB7Q9H672 318 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ASNSD1Q9NWL6 643 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 USP18Q9UMW8 372 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 STARD13Q9Y3M8 1113 aa12.9□□□□□ -0.34
RFC5-201ENST00000392542 MCF2LO15068 1137 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 TYROBPO43914 113 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 HMGCRP04035 888 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 P4HA1P13674 534 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 PCK1P35558 622 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 EIF3EP60228 445 aaKnown RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 IGBP1P78318 339 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms