RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 THOC1Q96FV9 657 aaKnown RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 CNPY3Q9BT09 278 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 TSPYL2Q9H2G4 693 aaPredicted RBP10.71□□□□□ -0.7
PKP4-201ENST00000389757 MROH7Q68CQ1 1323 aa10.71□□□□□ -0.7
PKP4-201ENST00000389757 F8VZ95 297 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 XYLBO75191 536 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 SPAG6O75602 509 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 KCNA2P16389 499 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 DDX5P17844 614 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 NDST1P52848 882 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 TRMT10CQ7L0Y3 403 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 DDIASQ8IXT1 998 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 FAM71DQ8N9W8 422 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 KIAA0895Q8NCT3 520 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 ELMO2Q96JJ3 720 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 MTMR9Q96QG7 549 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 TRIM15Q9C019 465 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 EML4Q9HC35 981 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 MLXIPLQ9NP71 852 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 L3MBTL1Q9Y468 752 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 DIAPH2O60879 1101 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 ZBTB48P10074 688 aaPredicted RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 ACAT1P24752 427 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 STIP1P31948 543 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 GEMP55040 296 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 TIGD7Q6NT04 549 aaPredicted RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 PLPPR4Q7Z2D5 763 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 ADCK2Q7Z695 626 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 JAMLQ86YT9 394 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 TPCN2Q8NHX9 752 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 GAD1Q99259 594 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 TMEM134Q9H6X4 195 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 KCNMB3Q9NPA1 279 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 CASS4Q9NQ75 786 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 TTC36A6NLP5 189 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 RECQL4O94761 1208 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 EIF4BP23588 611 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 PPP2R2AP63151 447 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 MDM2Q00987 491 aaPredicted RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 C2CD6Q53TS8 623 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 ZRANB3Q5FWF4 1079 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 SMARCD1Q96GM5 515 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 BTBD6Q96KE9 485 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 ZSWIM1Q9BR11 485 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 GOLPH3Q9H4A6 298 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 CPSF2Q9P2I0 782 aaKnown RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 CRLS1Q9UJA2 301 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 VPS28Q9UK41 221 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 SPECC1L-ADORA2AF8WAN1 911 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 ZBTB39O15060 712 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 PMPCBO75439 489 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 NFAT5O94916 1531 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 RHOCP08134 193 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 CKBP12277 381 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 DGKZQ13574 1117 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 UNC45BQ8IWX7 931 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 DNAJC7Q99615 494 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 CARD9Q9H257 536 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 TRIM45Q9H8W5 580 aaPredicted RBP10.7□□□□□ -0.7
PKP4-201ENST00000389757 CHMP2BQ9UQN3 213 aa10.7□□□□□ -0.7
PKP4-201ENST00000389757 BCL9LQ86UU0 1499 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 PLEKP08567 350 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 FDFT1P37268 417 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 FAM131BQ86XD5 332 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 RMDN2Q96LZ7 410 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 HTATIP2Q9BUP3 242 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 FRMD8Q9BZ67 464 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 FRMD8P1Q9BZ68 369 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 PDGFDQ9GZP0 370 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 SPATA31C2B4DYI2 1134 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 SPRP35270 261 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 TUFMP49411 452 aaKnown RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 SLC12A3P55017 1021 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 PHEXP78562 749 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 PTK6Q13882 451 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 CAPRIN1Q14444 709 aaKnown RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 C9orf72Q96LT7 481 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 ELOVL4Q9GZR5 314 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 BLOC1S4Q9NUP1 217 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 TSPAN16Q9UKR8 245 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 USP20Q9Y2K6 914 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 CYP3A7-CYP3A51PA0A087WV96 503 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 KDM1AO60341 852 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 RRM1P23921 792 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 CYP3A7P24462 503 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 HMOX2P30519 316 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 KCNA1Q09470 495 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 PDCLQ13371 301 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 PCBP1Q15365 356 aaKnown RBP eCLIP10.69□□□□□ -0.76e-6■■■■□ 21.3
PKP4-201ENST00000389757 SLC47A2Q86VL8 602 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 SLC13A5Q86YT5 568 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 ABRAQ8N0Z2 381 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 TATDN2Q93075 761 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 DMAP1Q9NPF5 467 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 THG1LQ9NWX6 298 aaKnown RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 PCDHGB4Q9UN71 923 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 AP4E1Q9UPM8 1137 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 BTBD19C9JJ37 291 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 SPAG7O75391 227 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms