RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 KIF9Q9HAQ2 790 aa27.35■■□□□ 1.97
KRT18-201ENST00000388835 HPS4Q9NQG7 708 aa27.35■■□□□ 1.97
KRT18-201ENST00000388835 PTPRDP23468 1912 aa27.34■■□□□ 1.97
KRT18-201ENST00000388835 ACTN4O43707 911 aaKnown RBP27.34■■□□□ 1.97
KRT18-201ENST00000388835 SLFN14P0C7P3 912 aa27.34■■□□□ 1.97
KRT18-201ENST00000388835 GRIK1P39086 918 aa27.34■■□□□ 1.97
KRT18-201ENST00000388835 WDR72Q3MJ13 1102 aa27.34■■□□□ 1.97
KRT18-201ENST00000388835 CC2D1AQ6P1N0 951 aaPredicted RBP27.34■■□□□ 1.97
KRT18-201ENST00000388835 OR6B3Q8NGW1 331 aa27.34■■□□□ 1.97
KRT18-201ENST00000388835 PAGE5Q96GU1 130 aa27.34■■□□□ 1.97
KRT18-201ENST00000388835 EXOC1Q9NV70 894 aa27.34■■□□□ 1.97
KRT18-201ENST00000388835 A0A1B0GVL5 298 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 KLRC4O43908 158 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 GNL1P36915 607 aaPredicted RBP27.33■■□□□ 1.97
KRT18-201ENST00000388835 CASP4P49662 377 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 TNNC1P63316 161 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 TRPC3Q13507 836 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 RUNX3Q13761 415 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 MAPRE1Q15691 268 aaKnown RBP27.33■■□□□ 1.97
KRT18-201ENST00000388835 MDH1BQ5I0G3 518 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 SLC22A12Q96S37 553 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 GZF1Q9H116 711 aaPredicted RBP27.33■■□□□ 1.97
KRT18-201ENST00000388835 CGNQ9P2M7 1197 aaKnown RBP27.33■■□□□ 1.97
KRT18-201ENST00000388835 NME7Q9Y5B8 376 aa27.33■■□□□ 1.97
KRT18-201ENST00000388835 OTOL1A6NHN0 477 aaPredicted RBP27.32■■□□□ 1.96
KRT18-201ENST00000388835 SOBPA7XYQ1 873 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 PHACTR2O75167 634 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 CLSTN1O94985 981 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 CKMP06732 381 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 ARSAP15289 507 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 MYL6P60660 151 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 C12orf56Q8IXR9 622 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 PCED1BQ96HM7 432 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 C2orf42Q9NWW7 574 aa27.32■■□□□ 1.96
KRT18-201ENST00000388835 NXF1Q9UBU9 619 aaKnown RBP27.32■■□□□ 1.96
KRT18-201ENST00000388835 TRAV19A0A0A6YYK7 116 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 PFKFB1P16118 471 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 DMWDQ09019 674 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 STK4Q13043 487 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 ZNF268Q14587 947 aaPredicted RBP27.31■■□□□ 1.96
KRT18-201ENST00000388835 LPAL2Q16609 132 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 VSTM1Q6UX27 236 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 ARL14EPQ8N8R7 260 aaPredicted RBP27.31■■□□□ 1.96
KRT18-201ENST00000388835 FSIP1Q8NA03 581 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 MYCBPAPQ8TBZ2 947 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 PLEKHO2Q8TD55 490 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 C2orf78A6NCI8 922 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 USP17L7P0C7H9 530 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 ANXA13P27216 316 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 CCINQ13939 588 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 KMT5BQ4FZB7 885 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 KIAA0895Q8NCT3 520 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 RMDN1Q96DB5 314 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 DPEP3Q9H4B8 488 aa27.31■■□□□ 1.96
KRT18-201ENST00000388835 ATG2BQ96BY7 2078 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 DMXL1Q9Y485 3027 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 CHURC1-FNTBB4DL54 471 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 TACC1O75410 805 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 FNTBP49356 437 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 FAM160A1Q05DH4 1040 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 BIRC3Q13489 604 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 MTF1Q14872 753 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 HEATR6Q6AI08 1181 aaKnown RBP27.3■■□□□ 1.96
KRT18-201ENST00000388835 SECISBP2LQ93073 1101 aaKnown RBP27.3■■□□□ 1.96
KRT18-201ENST00000388835 SPATA17Q96L03 361 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 SPATA32Q96LK8 384 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 DCHS1Q96JQ0 3298 aa27.3■■□□□ 1.96
KRT18-201ENST00000388835 USP46P62068 366 aa27.29■■□□□ 1.96
KRT18-201ENST00000388835 GOLGA5Q8TBA6 731 aa27.29■■□□□ 1.96
KRT18-201ENST00000388835 PTPN1P18031 435 aaKnown RBP27.28■■□□□ 1.96
KRT18-201ENST00000388835 CMA1P23946 247 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 HOXC13P31276 330 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 KCNB1Q14721 858 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 PDGFRLQ15198 375 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 PRR23BQ6ZRT6 265 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 DENND5BQ6ZUT9 1274 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 SYAP1Q96A49 352 aaPredicted RBP27.28■■□□□ 1.96
KRT18-201ENST00000388835 ELMO3Q96BJ8 720 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 CHFRQ96EP1 664 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 XYLT2Q9H1B5 865 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 DUS2Q9NX74 493 aaKnown RBP27.28■■□□□ 1.96
KRT18-201ENST00000388835 GCNT4Q9P109 453 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 RAB23Q9ULC3 237 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 WNT6Q9Y6F9 365 aa27.28■■□□□ 1.96
KRT18-201ENST00000388835 LRRIQ3A6PVS8 624 aaPredicted RBP27.27■■□□□ 1.96
KRT18-201ENST00000388835 A8MXQ7 604 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 F8VP50 259 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 K7ESF4 209 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 TRIM66O15016 1216 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 HDCP19113 662 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 ATICP31939 592 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 GRSF1Q12849 480 aaKnown RBP eCLIP27.27■■□□□ 1.96
KRT18-201ENST00000388835 ZNF77Q15935 545 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 TDRD10Q5VZ19 366 aaKnown RBP27.27■■□□□ 1.96
KRT18-201ENST00000388835 FSTL4Q6MZW2 842 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 ZDHHC9Q9Y397 364 aa27.27■■□□□ 1.96
KRT18-201ENST00000388835 HELZP42694 1942 aaKnown RBP27.27■■□□□ 1.96
KRT18-201ENST00000388835 CLDN5O00501 218 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 KRT85P78386 507 aa27.26■■□□□ 1.96
KRT18-201ENST00000388835 PSMD2Q13200 908 aa27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms