RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 THAP7Q9BT49 309 aaPredicted RBP2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 TPSD1Q9BZJ3 242 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 BHMT2Q9H2M3 363 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 KLK15Q9H2R5 256 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 A1CFQ9NQ94 594 aaKnown RBP2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 STK32BQ9NY57 414 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 DKK3Q9UBP4 350 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 CPA4Q9UI42 421 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 ADAM21Q9UKJ8 722 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 G3BP2Q9UN86 482 aaKnown RBP2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 AOX1Q06278 1338 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 VSTM5A8MXK1 200 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 GOLIM4O00461 696 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZNF213O14771 459 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 PPM1DO15297 605 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 TBC1D4O60343 1298 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 RBMXL2O75526 392 aaKnown RBP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 RHOP08100 348 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 CHRM2P08172 466 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 KITP10721 976 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 KLRC1P26715 233 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 CD38P28907 300 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 SLC7A1P30825 629 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 PTH2RP49190 550 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 PDE6CP51160 858 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 SUMO3P55854 103 aaPredicted RBP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 PROK1P58294 105 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 KRTAP10-9P60411 292 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 FMO1Q01740 532 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 SLC13A2Q13183 592 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 HLTFQ14527 1009 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 CNGA2Q16280 664 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 ARHGAP29Q52LW3 1261 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 PLAC9Q5JTB6 97 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 AARS2Q5JTZ9 985 aaKnown RBP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 DARS2Q6PI48 645 aaKnown RBP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 MTHFD1LQ6UB35 978 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 LAYNQ6UX15 382 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZNF280BQ86YH2 543 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 FAM156AQ8NDB6 213 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 RP9Q8TA86 221 aaKnown RBP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 ATG4AQ8WYN0 398 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 LRTOMTQ8WZ04 291 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 TBC1D5Q92609 795 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 REPS1Q96D71 796 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZC3H10Q96K80 434 aaKnown RBP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 TRIM5Q9C035 493 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 TTYH3Q9C0H2 523 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 LRRC27Q9C0I9 530 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 CXorf36Q9H7Y0 433 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 ARHGEF3Q9NR81 526 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 DLL3Q9NYJ7 618 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 COL20A1Q9P218 1284 aa2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 DNMT3BQ9UBC3 853 aaKnown RBP2.88□□□□□ -1.95
RNU6-541P-201ENST00000384709 LRRC3CA6NJW4 275 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 MARCH6O60337 910 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 PPFIA2O75334 1257 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 PARNO95453 639 aaKnown RBP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 LATS1O95835 1130 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 TTLL1O95922 423 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 C1RP00736 705 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 IL6RP08887 468 aaPredicted RBP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 MYBP10242 640 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 NR2F6P10588 404 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 IL1R1P14778 569 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 DRD4P21917 467 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 C21orf58P58505 322 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 KRTAP10-7P60409 375 aaPredicted RBP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 HTRA4P83105 476 aaPredicted RBP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 TIAL1Q01085 375 aaKnown RBP eCLIP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 SP2Q02086 613 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 FOXF2Q12947 444 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 NPY5RQ15761 445 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 TBCCQ15814 346 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 CCDC142Q17RM4 750 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 MGAT5BQ3V5L5 792 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 SLC44A4Q53GD3 710 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 ARHGAP40Q5TG30 622 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 DCAF12L1Q5VU92 463 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 DPY19L2P1Q6NXN4 242 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 PTF1AQ7RTS3 328 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 SESTD1Q86VW0 696 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 FMNL3Q8IVF7 1028 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 ABRAQ8N0Z2 381 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 SLC15A4Q8N697 577 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 OR56A3Q8NH54 315 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 PHKBQ93100 1093 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 FSD1LQ9BXM9 530 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 TRIM36Q9NQ86 728 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 GEMIN8Q9NWZ8 242 aaKnown RBP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 PTGFRNQ9P2B2 879 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 CHPF2Q9P2E5 772 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 CPNE7Q9UBL6 633 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 TPCN1Q9ULQ1 816 aa2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 COL3A1P02461 1466 aaPredicted RBP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 FRMPD2Q68DX3 1309 aaPredicted RBP2.87□□□□□ -1.95
RNU6-541P-201ENST00000384709 CFAP69A5D8W1 941 aa2.86□□□□□ -1.95
RNU6-541P-201ENST00000384709 TMEM233B4DJY2 109 aa2.86□□□□□ -1.95
RNU6-541P-201ENST00000384709 H0YIZ8 118 aa2.86□□□□□ -1.95
RNU6-541P-201ENST00000384709 PYCARD-AS1I3L0S3 204 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms