RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TINAGL1Q9GZM7 467 aaPredicted RBP-0.05□□□□□ -2.42
RNU6-540P-201ENST00000384622 MMP28Q9H239 520 aa-0.05□□□□□ -2.42
RNU6-540P-201ENST00000384622 DLGAP4Q9Y2H0 992 aa-0.05□□□□□ -2.42
RNU6-540P-201ENST00000384622 PCDHA8Q9Y5H6 950 aa-0.05□□□□□ -2.42
RNU6-540P-201ENST00000384622 CROCCQ5TZA2 2017 aa-0.05□□□□□ -2.42
RNU6-540P-201ENST00000384622 ASXL2Q76L83 1435 aa-0.05□□□□□ -2.42
RNU6-540P-201ENST00000384622 A0A0B4J269 797 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 SLC12A8A0AV02 714 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZNF814B7Z6K7 855 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 F5H697 171 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 GCATO75600 419 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 SUN1O94901 812 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 PCDH8O95206 1070 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 PDE8BO95263 885 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ARIH2O95376 493 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 KLKB1P03952 638 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 CRHR1P34998 444 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 NPTX2P47972 431 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 RFX2P48378 723 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 SEC61A1P61619 476 aaKnown RBP-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 SLFN5Q08AF3 891 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZNF844Q08AG5 666 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 MGAT5Q09328 741 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 TUBB3Q13509 450 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 HABP2Q14520 560 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 C19orf54Q5BKX5 351 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 TMTC4Q5T4D3 741 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 TEDDM1Q5T9Z0 273 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 GPR157Q5UAW9 335 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 HIST2H2BDQ6DRA6 164 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 TIGD7Q6NT04 549 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZNF529Q6P280 563 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 TMPRSS9Q7Z410 1059 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 EXOC3L1Q86VI1 746 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 CDC20BQ86Y33 519 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 KRTAP13-1Q8IUC0 172 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ERC1Q8IUD2 1116 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 EPHX4Q8IUS5 362 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 SRBD1Q8N5C6 995 aaKnown RBP-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 CDYL2Q8N8U2 506 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 OR6P1Q8NGX9 317 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 KLHDC4Q8TBB5 520 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 RFT1Q96AA3 541 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZNF668Q96K58 619 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 CCDC17Q96LX7 622 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 FDXACB1Q9BRP7 624 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 MVB12BQ9H7P6 319 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 KANSL2Q9H9L4 492 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 CHST11Q9NPF2 352 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 FZD3Q9NPG1 666 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZNF275Q9NSD4 429 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 CTTNBP2NLQ9P2B4 639 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 DNAJB11Q9UBS4 358 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 GGT7Q9UJ14 662 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 PCDHA12Q9UN75 941 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 TRAF6Q9Y4K3 522 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 ITGB4P16144 1822 aa-0.06□□□□□ -2.42
RNU6-540P-201ENST00000384622 A0A1W2PQU0 124 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 CDHR4A6H8M9 788 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 GSG1L2A8MUP6 293 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 FAM72CH0Y354 149 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 ADCY6O43306 1168 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 TRIAP1O43715 76 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 XPNPEP2O43895 674 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 TCEA3O75764 348 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 PRPF6O94906 941 aaKnown RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 MTHFD1P11586 935 aaKnown RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 EN2P19622 333 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 GATA2P23769 480 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 GIPRP48546 466 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 PDE1AP54750 535 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 NRG3P56975 720 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 GPSM2P81274 684 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 MC2RQ01718 297 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 TBX2Q13207 712 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 RFTN1Q14699 578 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 TBC1D25Q3MII6 688 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 FAM72AQ5TYM5 149 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 AFMIDQ63HM1 303 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 NUGGCQ68CJ6 796 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 FAM72DQ6L9T8 149 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 KIAA1841Q6NSI8 718 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 ARHGAP11AQ6P4F7 1023 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 ABHD15Q6UXT9 468 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 PARS2Q7L3T8 475 aaKnown RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZNF572Q7Z3I7 529 aaPredicted RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 UBE3BQ7Z3V4 1068 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 FAM72BQ86X60 149 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 LRRC71Q8N4P6 559 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 PRR26Q8N8Z3 221 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 POC1AQ8NBT0 407 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 TBC1D15Q8TC07 691 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 PNISRQ8TF01 805 aaKnown RBP-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 SNX33Q8WV41 574 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 FAM161BQ96MY7 647 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 PRDM12Q9H4Q4 367 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 ARHGEF4Q9NR80 690 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 USP18Q9UMW8 372 aa-0.07□□□□□ -2.42
RNU6-540P-201ENST00000384622 MYPNQ86TC9 1320 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 A0A0J9YWU9 116 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms