RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 WNT3AP56704 352 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GNB1P62873 340 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ATP2C1P98194 919 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ID2Q02363 134 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 NHLH2Q02577 135 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ZNF252P-AS1Q0IIN9 211 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 GRSF1Q12849 480 aaKnown RBP eCLIP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 KLF1Q13351 362 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 VWA2Q5GFL6 755 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SPIN3Q5JUX0 258 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CEP85Q6P2H3 762 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 LRIG3Q6UXM1 1119 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ZNF813Q6ZN06 617 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 USP49Q70CQ1 688 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 CREB3L2Q70SY1 520 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 EXOC3L1Q86VI1 746 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RBFAQ8N0V3 343 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PNLDC1Q8NA58 520 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MARCH1Q8TCQ1 289 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PLEKHO2Q8TD55 490 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 STK35Q8TDR2 534 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SRSF12Q8WXF0 261 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TFAP2BQ92481 460 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 AHCYL2Q96HN2 611 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 BOD1Q96IK1 185 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TRIM51Q9BSJ1 452 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 YIPF4Q9BSR8 244 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SLC4A1APQ9BWU0 796 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ASPNQ9BXN1 380 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SRRTQ9BXP5 876 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 TBC1D2Q9BYX2 928 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 AP5M1Q9H0R1 490 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 RBM38Q9H0Z9 239 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ASCC2Q9H1I8 757 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SLC25A18Q9H1K4 315 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SLC6A15Q9H2J7 730 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 EPB41L1Q9H4G0 881 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ELP3Q9H9T3 547 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ZNF334Q9HCZ1 680 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 ADAM22Q9P0K1 906 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 SH3BP4Q9P0V3 963 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 PEF1Q9UBV8 284 aaKnown RBP-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 NDOR1Q9UHB4 597 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MYO6Q9UM54 1294 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 MINPP1Q9UNW1 487 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 VSIG4Q9Y279 399 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 KLHDC2Q9Y2U9 406 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 LOXL2Q9Y4K0 774 aa-1.84□□□□□ -2.7
RNU6-1340P-201ENST00000384438 AATKQ6ZMQ8 1374 aa-1.85□□□□□ -2.7
RNU6-1340P-201ENST00000384438 DNAH6Q9C0G6 4158 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CDC42BPBQ9Y5S2 1711 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 A0A1B0GTW7 788 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MEIS3P2A8K0S8 358 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 FAM171A2A8MVW0 826 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TULP2O00295 520 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HAT1O14929 419 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DSCR3O14972 297 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 YY2O15391 372 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PROM1O43490 865 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 STC2O76061 302 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PRAMEF1O95521 474 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TUBBP07437 444 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CPEP16870 476 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZNF12P17014 697 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PDHA2P29803 388 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SLC5A2P31639 672 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RBM25P49756 843 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PPOXP50336 477 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TUBB4BP68371 445 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 EIF4G2P78344 907 aaKnown RBP eCLIP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TLE1Q04724 770 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PPATQ06203 517 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 Q0VFX4 171 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 UNC119Q13432 240 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 C16orf72Q14CZ0 275 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RBMY1FQ15415 496 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CSPP1Q1MSJ5 1256 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KRT24Q2M2I5 525 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MINDY4Q4G0A6 757 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 AARS2Q5JTZ9 985 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 VWA1Q6PCB0 445 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DOK6Q6PKX4 331 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PAQR6Q6TCH4 344 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KSR2Q6VAB6 950 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GDPD4Q6W3E5 623 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RFX8Q6ZV50 586 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IL17RELQ6ZVW7 336 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PLD3Q8IV08 490 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CLASRPQ8N2M8 674 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CIARTQ8N365 385 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 EFHBQ8N7U6 833 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PPM1NQ8N819 430 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KIAA0895Q8NCT3 520 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PTCD3Q96EY7 689 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RITA1Q96K30 269 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TCF12Q99081 682 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 WDR83Q9BRX9 315 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZNF649Q9BS31 505 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PPP1R12CQ9BZL4 782 aa-1.85□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PDE11AQ9HCR9 933 aa-1.85□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms