RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ANXA13P27216 316 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 PDE6CP51160 858 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 PSMC1P62191 440 aaKnown RBP28.25■■■□□ 2.11
NPHP3-202ENST00000383282 KCNB1Q14721 858 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 ZNF77Q15935 545 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 FBXO43Q4G163 708 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 FAM26FQ5R3K3 315 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 KBTBD7Q8WVZ9 684 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 ATP2A3Q93084 1043 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 CEP295NLQ96MC4 621 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 P2RY13Q9BPV8 354 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 ECT2Q9H8V3 914 aa28.25■■■□□ 2.11
NPHP3-202ENST00000383282 CCDC163A0A0D9SF12 145 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 CUTAO60888 179 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 YEATS4O95619 227 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 TNNI1P19237 187 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 WARSP23381 471 aaKnown RBP28.24■■■□□ 2.11
NPHP3-202ENST00000383282 LMO2P25791 158 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 GRIK1P39086 918 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 USP4Q13107 963 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 SNRNP35Q16560 246 aaKnown RBP28.24■■■□□ 2.11
NPHP3-202ENST00000383282 PKN3Q6P5Z2 889 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 PRR23CQ6ZRP0 262 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 LIMS2Q7Z4I7 341 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 FAM160A2Q8N612 972 aaPredicted RBP28.24■■■□□ 2.11
NPHP3-202ENST00000383282 ARL14EPQ8N8R7 260 aaPredicted RBP28.24■■■□□ 2.11
NPHP3-202ENST00000383282 RDH13Q8NBN7 331 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 ZNF507Q8TCN5 953 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 CHFRQ96EP1 664 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 SPATA17Q96L03 361 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 CYP2S1Q96SQ9 504 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 EHD2Q9NZN4 543 aa28.24■■■□□ 2.11
NPHP3-202ENST00000383282 TFIP11Q9UBB9 837 aaKnown RBP28.24■■■□□ 2.11
NPHP3-202ENST00000383282 RNF40O75150 1001 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 ATP2C2O75185 946 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 EGFP01133 1207 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 DLATP10515 647 aaKnown RBP28.23■■■□□ 2.11
NPHP3-202ENST00000383282 BDNFP23560 247 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 GJA4P35212 333 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 GALK1P51570 392 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 CYP27A1Q02318 531 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 NR1H3Q13133 447 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 CNNM4Q6P4Q7 775 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 TRAPPC11Q7Z392 1133 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 SLC22A12Q96S37 553 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 MAGEF1Q9HAY2 307 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 AGPAT3Q9NRZ7 376 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 DENND4CQ5VZ89 1909 aa28.23■■■□□ 2.11
NPHP3-202ENST00000383282 UBE4BO95155 1302 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.22■■■□□ 2.11
NPHP3-202ENST00000383282 DCDC2BA2VCK2 349 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 TRIM66O15016 1216 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 PDGFRBP09619 1106 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 CCDC192P0DO97 292 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 HDCP19113 662 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 SNRPFP62306 86 aaKnown RBP28.22■■■□□ 2.11
NPHP3-202ENST00000383282 DENND5BQ6ZUT9 1274 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 EPM2AIP1Q7L775 607 aaPredicted RBP28.22■■■□□ 2.11
NPHP3-202ENST00000383282 HS2ST1Q7LGA3 356 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 CAMKK1Q8N5S9 505 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 SH3RF2Q8TEC5 729 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 GAB3Q8WWW8 586 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 SNX25Q9H3E2 840 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 CRTAC1Q9NQ79 661 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 TRPM5Q9NZQ8 1165 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 WNT6Q9Y6F9 365 aa28.22■■■□□ 2.11
NPHP3-202ENST00000383282 ZNF638Q14966 1978 aaKnown RBP28.21■■■□□ 2.11
NPHP3-202ENST00000383282 C2orf78A6NCI8 922 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 RPP40O75818 363 aaKnown RBP28.21■■■□□ 2.11
NPHP3-202ENST00000383282 HOXC13P31276 330 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 HOXD13P35453 343 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 PXNP49023 591 aaPredicted RBP28.21■■■□□ 2.11
NPHP3-202ENST00000383282 CACNA2D4Q7Z3S7 1137 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 CD101Q93033 1021 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 CGRRF1Q99675 332 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 C7orf25Q9BPX7 421 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 GCNT4Q9P109 453 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 ARHGAP26Q9UNA1 814 aa28.21■■■□□ 2.11
NPHP3-202ENST00000383282 SLC30A4O14863 429 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 CLIC2O15247 247 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 TGFB1I1O43294 461 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 TCF3P15923 654 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 PFKLP17858 780 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 GNL1P36915 607 aaPredicted RBP28.2■■■□□ 2.1
NPHP3-202ENST00000383282 CYP2J2P51589 502 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 TNNC1P63316 161 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 PSMD6Q15008 389 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 EML3Q32P44 896 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 SHC4Q6S5L8 630 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 UNC13DQ70J99 1090 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 NELFCDQ8IXH7 590 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 XXYLT1Q8NBI6 393 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 OR6B3Q8NGW1 331 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 CCDC26Q8TAB7 109 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 MYCBPAPQ8TBZ2 947 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 CCDC127Q96BQ5 260 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 PCED1BQ96HM7 432 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 LOXL4Q96JB6 756 aa28.2■■■□□ 2.1
NPHP3-202ENST00000383282 FBRSL1Q9HCM7 1045 aaKnown RBP28.2■■■□□ 2.1
NPHP3-202ENST00000383282 OBSL1O75147 1896 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms