RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 STKLD1Q8NE28 680 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 SPATA18Q8TC71 538 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 EXOC4Q96A65 974 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 TRMT2BQ96GJ1 504 aaKnown RBP24.31■■□□□ 1.48
VLDLR-201ENST00000382096 HHIPQ96QV1 700 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 PI4K2AQ9BTU6 479 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 DUSP15Q9H1R2 295 aaPredicted RBP24.31■■□□□ 1.48
VLDLR-201ENST00000382096 ABCB6Q9NP58 842 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 TFIP11Q9UBB9 837 aaKnown RBP24.31■■□□□ 1.48
VLDLR-201ENST00000382096 UXTQ9UBK9 157 aaPredicted RBP24.31■■□□□ 1.48
VLDLR-201ENST00000382096 L1RE1Q9UN81 338 aa24.31■■□□□ 1.48
VLDLR-201ENST00000382096 MAGED2Q9UNF1 606 aaPredicted RBP24.31■■□□□ 1.48
VLDLR-201ENST00000382096 ZZEF1O43149 2961 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 PRPF40AO75400 957 aaKnown RBP24.3■■□□□ 1.48
VLDLR-201ENST00000382096 PDIA4P13667 645 aaKnown RBP24.3■■□□□ 1.48
VLDLR-201ENST00000382096 FAM160A1Q05DH4 1040 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 MTF1Q14872 753 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 NAIF1Q69YI7 327 aaPredicted RBP24.3■■□□□ 1.48
VLDLR-201ENST00000382096 SCARA3Q6AZY7 606 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 SHC4Q6S5L8 630 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 TMEM86AQ8N2M4 240 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 CPA6Q8N4T0 437 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 GLIS3Q8NEA6 775 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 RPLP0P6Q8NHW5 317 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 MYRFLQ96LU7 910 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 ACBD6Q9BR61 282 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 PCIF1Q9H4Z3 704 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 ECT2Q9H8V3 914 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 PDE11AQ9HCR9 933 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 EBF1Q9UH73 591 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 SIX4Q9UIU6 781 aa24.3■■□□□ 1.48
VLDLR-201ENST00000382096 ABCA7Q8IZY2 2146 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 CUTAO60888 179 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 NOL4O94818 638 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 KCNK5O95279 499 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 HOXD13P35453 343 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 RBP5P82980 135 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 ELF2Q15723 593 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 ZNF77Q15935 545 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 EPM2AIP1Q7L775 607 aaPredicted RBP24.29■■□□□ 1.48
VLDLR-201ENST00000382096 CSGALNACT2Q8N6G5 542 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 IQUBQ8NA54 791 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 EZH1Q92800 747 aaPredicted RBP24.29■■□□□ 1.48
VLDLR-201ENST00000382096 PKMYT1Q99640 499 aa24.29■■□□□ 1.48
VLDLR-201ENST00000382096 EIF3DO15371 548 aaKnown RBP eCLIP24.28■■□□□ 1.48
VLDLR-201ENST00000382096 HUS1O60921 280 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 APBB3O95704 486 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 RPL10AP62906 217 aaKnown RBP24.28■■□□□ 1.48
VLDLR-201ENST00000382096 AMPD3Q01432 767 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 USP4Q13107 963 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 SDHAF4Q5VUM1 108 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 RNF43Q68DV7 783 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 TCEAL6Q6IPX3 200 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 LIMS2Q7Z4I7 341 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 TOP6BLQ8N6T0 577 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 OSCP1Q8WVF1 389 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 ATP2A3Q93084 1043 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 TCEAL3Q969E4 200 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 HPS3Q969F9 1004 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 ACDQ96AP0 544 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 FAM84AQ96KN4 292 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 MTMR12Q9C0I1 747 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 INTS13Q9NVM9 706 aa24.28■■□□□ 1.48
VLDLR-201ENST00000382096 DDX43Q9NXZ2 648 aaKnown RBP24.28■■□□□ 1.48
VLDLR-201ENST00000382096 GABRDO14764 452 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 RHOBTB1O94844 696 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 CYP2F1P24903 491 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 DMC1Q14565 340 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 DDR2Q16832 855 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 INTS6LQ5JSJ4 861 aaKnown RBP24.27■■□□□ 1.48
VLDLR-201ENST00000382096 ZNF507Q8TCN5 953 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 CD101Q93033 1021 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 DHX58Q96C10 678 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 SLC22A12Q96S37 553 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 C7orf25Q9BPX7 421 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 DUS2Q9NX74 493 aaKnown RBP24.27■■□□□ 1.48
VLDLR-201ENST00000382096 FAM208BQ5VWN6 2430 aa24.27■■□□□ 1.48
VLDLR-201ENST00000382096 ZNF233A6NK53 670 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 USP17L7P0C7H9 530 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 TMEM191BP0C7N4 346 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 MYL7Q01449 175 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 EHHADHQ08426 723 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 SURF1Q15526 300 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 EML3Q32P44 896 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 CBWD2Q8IUF1 395 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 EDEM2Q9BV94 578 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 MAGEF1Q9HAY2 307 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 KIAA1586Q9HCI6 787 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 HSPBP1Q9NZL4 362 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 SNX9Q9Y5X1 595 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 PTPRJQ12913 1337 aa24.26■■□□□ 1.47
VLDLR-201ENST00000382096 ASPMQ8IZT6 3477 aa24.25■■□□□ 1.47
VLDLR-201ENST00000382096 TRAV19A0A0A6YYK7 116 aa24.25■■□□□ 1.47
VLDLR-201ENST00000382096 BCLAF3A2AJT9 711 aaKnown RBP24.25■■□□□ 1.47
VLDLR-201ENST00000382096 DCLK1O15075 740 aa24.25■■□□□ 1.47
VLDLR-201ENST00000382096 CKMP06732 381 aa24.25■■□□□ 1.47
VLDLR-201ENST00000382096 KRT19P08727 400 aa24.25■■□□□ 1.47
VLDLR-201ENST00000382096 ZSCAN22P10073 491 aaPredicted RBP24.25■■□□□ 1.47
VLDLR-201ENST00000382096 LHX1P48742 406 aa24.25■■□□□ 1.47
VLDLR-201ENST00000382096 ASIC1P78348 528 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms