RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 HIRAP54198 1017 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 MBTD1Q05BQ5 628 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 MGAT5Q09328 741 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 DNAJC3Q13217 504 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 ACAP1Q15027 740 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 ANKRD22Q5VYY1 191 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 CDR2LQ86X02 465 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 ECHDC2Q86YB7 292 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 RFX6Q8HWS3 928 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 DHX37Q8IY37 1157 aaKnown RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 EMC1Q8N766 993 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 NAT8LQ8N9F0 302 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 SLC4A11Q8NBS3 891 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 KCTD6Q8NC69 237 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 LRRC8CQ8TDW0 803 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 FBF1Q8TES7 1133 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 TRAPPC12Q8WVT3 735 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 MRRFQ96E11 262 aaKnown RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 ZNF668Q96K58 619 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 SSU72Q9NP77 194 aaKnown RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 RGS17Q9UGC6 210 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-203ENST00000381018 SIX4Q9UIU6 781 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
TRIM23-203ENST00000381018 CLUHO75153 1309 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 SOCS7O14512 581 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 MCF2LO15068 1137 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 TYROBPO43914 113 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 APOC2P02655 101 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 GJB1P08034 283 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 NFICP08651 508 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 CCNB1P14635 433 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 GBP2P32456 591 aaPredicted RBP12.5□□□□□ -0.41
TRIM23-203ENST00000381018 RPL22P35268 128 aaKnown RBP12.5□□□□□ -0.41
TRIM23-203ENST00000381018 CDH8P55286 799 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 PTPN11Q06124 597 aaPredicted RBP12.5□□□□□ -0.41
TRIM23-203ENST00000381018 KLHL38Q2WGJ6 581 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 FNBP1LQ5T0N5 605 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 HHATQ5VTY9 493 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 EFCAB12Q6NXP0 572 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 C1orf127Q8N9H9 656 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 SMYD3Q9H7B4 428 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 C10orf88Q9H8K7 445 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 ARHGEF3Q9NR81 526 aa12.5□□□□□ -0.41
TRIM23-203ENST00000381018 A0A1W2PPM1 405 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 E7ESA3 106 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 M0QYV0 167 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 HBP1O60381 514 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 CILPO75339 1184 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 MICAL2O94851 1124 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ZWINTO95229 277 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 SLC25A27O95847 323 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ITGB3P05106 788 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 PGK2P07205 417 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 CD48P09326 243 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 MIPP30301 263 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 SSTR1P30872 391 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ATICP31939 592 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 GABRB2P47870 512 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 CLCN3P51790 818 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
TRIM23-203ENST00000381018 GAD2Q05329 585 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ORC1Q13415 861 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 SETDB1Q15047 1291 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 E2F5Q15329 346 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 MSS51Q4VC12 460 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ASRGL1Q7L266 308 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 CMASQ8NFW8 434 aaPredicted RBP12.49□□□□□ -0.41
TRIM23-203ENST00000381018 HSPH1Q92598 858 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 MCRS1Q96EZ8 462 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 TMEM176AQ96HP8 235 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ACSS3Q9H6R3 686 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 RSAD1Q9HA92 442 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 TXLNGQ9NUQ3 528 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 PCSK1NQ9UHG2 260 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
TRIM23-203ENST00000381018 GRID1Q9ULK0 1009 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
TRIM23-203ENST00000381018 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRIM23-203ENST00000381018 USH1CQ9Y6N9 552 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 TRIP11Q15643 1979 aa12.49□□□□□ -0.41
TRIM23-203ENST00000381018 LACTBL1A8MY62 500 aa12.48□□□□□ -0.41
TRIM23-203ENST00000381018 EDF1O60869 148 aaKnown RBP12.48□□□□□ -0.41
TRIM23-203ENST00000381018 CNMDO75829 334 aa12.48□□□□□ -0.41
TRIM23-203ENST00000381018 TRUB2O95900 331 aaKnown RBP12.48□□□□□ -0.41
TRIM23-203ENST00000381018 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
TRIM23-203ENST00000381018 P4HA1P13674 534 aa12.48□□□□□ -0.41
TRIM23-203ENST00000381018 TSHRP16473 764 aa12.48□□□□□ -0.41
TRIM23-203ENST00000381018 KRT4P19013 534 aa12.48□□□□□ -0.41
TRIM23-203ENST00000381018 MAP2K2P36507 400 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms