RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ZNF423Q2M1K9 1284 aa18.68■□□□□ 0.58
HMGN1-203ENST00000380748 MAP7D1Q3KQU3 841 aa18.68■□□□□ 0.58
HMGN1-203ENST00000380748 PEAR1Q5VY43 1037 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-203ENST00000380748 ARL14EPQ8N8R7 260 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-203ENST00000380748 TXNDC5Q8NBS9 432 aaKnown RBP18.68■□□□□ 0.58
HMGN1-203ENST00000380748 OR2I1PQ8NGU4 316 aa18.68■□□□□ 0.58
HMGN1-203ENST00000380748 WHAMMQ8TF30 809 aa18.68■□□□□ 0.58
HMGN1-203ENST00000380748 BBC3Q96PG8 261 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-203ENST00000380748 CPSF3Q9UKF6 684 aaKnown RBP18.68■□□□□ 0.58
HMGN1-203ENST00000380748 PCDH15Q96QU1 1955 aa18.68■□□□□ 0.58
HMGN1-203ENST00000380748 ANAPC1Q9H1A4 1944 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 C2orf78A6NCI8 922 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 SGK1O00141 431 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 KLF8O95600 359 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-203ENST00000380748 NFATC1O95644 943 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 TAF6P49848 677 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 NCKAP1LP55160 1127 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 MESP2Q0VG99 397 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 ZRSR1Q15695 479 aaKnown RBP18.67■□□□□ 0.58
HMGN1-203ENST00000380748 IL17AQ16552 155 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 CD302Q8IX05 232 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 IL17RCQ8NAC3 791 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 TRMT2BQ96GJ1 504 aaKnown RBP18.67■□□□□ 0.58
HMGN1-203ENST00000380748 MSTO1Q9BUK6 570 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 RAB34Q9BZG1 259 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 FOXP1Q9H334 677 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-203ENST00000380748 GCNT4Q9P109 453 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 BCCIPQ9P287 314 aaKnown RBP eCLIP18.67■□□□□ 0.58
HMGN1-203ENST00000380748 UXTQ9UBK9 157 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-203ENST00000380748 KCNG1Q9UIX4 513 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 SLC6A14Q9UN76 642 aa18.67■□□□□ 0.58
HMGN1-203ENST00000380748 HELZP42694 1942 aaKnown RBP18.66■□□□□ 0.58
HMGN1-203ENST00000380748 A0A0B4J269 797 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 OPHN1O60890 802 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 CD59P13987 128 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 CYP2F1P24903 491 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 TIE1P35590 1138 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 MRPS21P82921 87 aaKnown RBP18.66■□□□□ 0.58
HMGN1-203ENST00000380748 LMBRD2Q68DH5 695 aaPredicted RBP18.66■□□□□ 0.58
HMGN1-203ENST00000380748 MINDY1Q8N5J2 469 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 DEFB119Q8N690 84 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 LRRC15Q8TF66 581 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 HMGB4Q8WW32 186 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 C8orf76Q96K31 380 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 MYRFLQ96LU7 910 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 CAMK1GQ96NX5 476 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 CCSER1Q9C0I3 900 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 CAPN10Q9HC96 672 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 ZDHHC4Q9NPG8 344 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 DERAQ9Y315 318 aa18.66■□□□□ 0.58
HMGN1-203ENST00000380748 PIGRP01833 764 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 HOXD12P35452 270 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 DPP6P42658 865 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 TRAPPC10P48553 1259 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 ZXDBP98169 803 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 TSPY1Q01534 308 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 GFPT1Q06210 699 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-203ENST00000380748 CCDC142Q17RM4 750 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 DUOXA1Q1HG43 343 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 SPDYCQ5MJ68 293 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 SLC39A4Q6P5W5 647 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 SYT2Q8N9I0 419 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-203ENST00000380748 HNRNPLLQ8WVV9 542 aaKnown RBP18.65■□□□□ 0.58
HMGN1-203ENST00000380748 POLMQ9NP87 494 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-203ENST00000380748 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
HMGN1-203ENST00000380748 PLXNB3Q9ULL4 1909 aa18.64■□□□□ 0.58
HMGN1-203ENST00000380748 KPNA7A9QM74 516 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 H0YCG3 227 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 CYP17A1P05093 508 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 SERPINF2P08697 491 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 TCF3P15923 654 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 SLC6A11P48066 632 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 ACOT2P49753 483 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 SLC12A3P55017 1021 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 RPL10AP62906 217 aaKnown RBP18.64■□□□□ 0.57
HMGN1-203ENST00000380748 KCNB1Q14721 858 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 NFE2Q16621 373 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-203ENST00000380748 EMC10Q5UCC4 262 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 CEP76Q8TAP6 659 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 LEO1Q8WVC0 666 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-203ENST00000380748 PNMA5Q96PV4 448 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 PLIN2Q99541 437 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 CCDC86Q9H6F5 360 aaKnown RBP18.64■□□□□ 0.57
HMGN1-203ENST00000380748 DPP3Q9NY33 737 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 LARSQ9P2J5 1176 aaKnown RBP18.64■□□□□ 0.57
HMGN1-203ENST00000380748 NOL7Q9UMY1 257 aaKnown RBP18.64■□□□□ 0.57
HMGN1-203ENST00000380748 PCDHB6Q9Y5E3 794 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 CEP192Q8TEP8 1941 aa18.64■□□□□ 0.57
HMGN1-203ENST00000380748 TCRBV21S2A2A0A5A6 115 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 ADAM23O75077 832 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 HDCP19113 662 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 ACAT1P24752 427 aaKnown RBP18.63■□□□□ 0.57
HMGN1-203ENST00000380748 TOB1P50616 345 aaPredicted RBP18.63■□□□□ 0.57
HMGN1-203ENST00000380748 C12orf40Q86WS4 652 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 PGBD3Q8N328 593 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 PNPLA1Q8N8W4 532 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 MDM1Q8TC05 714 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 KCNN1Q92952 543 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 ABCB6Q9NP58 842 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 RAXQ9Y2V3 346 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms