RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TNNC2P02585 160 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 PDCP20941 246 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 RAP1GAPP47736 663 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 USP4Q13107 963 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 NR1H3Q13133 447 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 DMC1Q14565 340 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 ELF2Q15723 593 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 C4orf50Q6ZRC1 276 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 ACDQ96AP0 544 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 MYRFLQ96LU7 910 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 PKMYT1Q99640 499 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 SYT15Q9BQS2 421 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 MAGEC2Q9UBF1 373 aaPredicted RBP24.75■■□□□ 1.55
U2AF1-202ENST00000380276 SIX4Q9UIU6 781 aa24.75■■□□□ 1.55
U2AF1-202ENST00000380276 ATP2C2O75185 946 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 GBP1P32455 592 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 DGKEP52429 567 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 CYP27A1Q02318 531 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 SOWAHAQ2M3V2 549 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 CFAP221Q4G0U5 840 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 STPG1Q5TH74 334 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 CCDC65Q8IXS2 484 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 MYLPFQ96A32 169 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 FUBP3Q96I24 572 aaKnown RBP eCLIP24.74■■□□□ 1.55
U2AF1-202ENST00000380276 HPDLQ96IR7 371 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 PCDHGA5Q9Y5G8 931 aa24.74■■□□□ 1.55
U2AF1-202ENST00000380276 DCLK1O15075 740 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 APBB3O95704 486 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 HDCP19113 662 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 ANXA13P27216 316 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 GRIK1P39086 918 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 LIMK1P53667 647 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 SEC13P55735 322 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 RESTQ13127 1097 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 EML3Q32P44 896 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 PLK5Q496M5 336 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 PDILTQ8N807 584 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 SPATA18Q8TC71 538 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 MMS19Q96T76 1030 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 VPS45Q9NRW7 570 aa24.73■■□□□ 1.55
U2AF1-202ENST00000380276 GABRDO14764 452 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 RHOBTB1O94844 696 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 PDGFRBP09619 1106 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 BDNFP23560 247 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 CREB5Q02930 508 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 STXBP4Q6ZWJ1 553 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 SYT13Q7L8C5 426 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 OR5B17Q8NGF7 314 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 CXorf38Q8TB03 319 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 INTS13Q9NVM9 706 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 CDH9Q9ULB4 789 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 INVSQ9Y283 1065 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 EML5Q05BV3 1969 aa24.72■■□□□ 1.55
U2AF1-202ENST00000380276 ZNF233A6NK53 670 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 NFATC1O95644 943 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 ABL1P00519 1130 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 MAGEA11P43364 429 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 N4BP2L1Q5TBK1 243 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-202ENST00000380276 RNF43Q68DV7 783 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 TCEAL6Q6IPX3 200 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 TTC30AQ86WT1 665 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 TSTD1Q8NFU3 115 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 EZH1Q92800 747 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-202ENST00000380276 TCEAL3Q969E4 200 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 ZC3H10Q96K80 434 aaKnown RBP24.71■■□□□ 1.55
U2AF1-202ENST00000380276 TPSD1Q9BZJ3 242 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 DUSP15Q9H1R2 295 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-202ENST00000380276 LINC00597Q9H2U6 94 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 TRPM5Q9NZQ8 1165 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 GCNT4Q9P109 453 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 ANGPTL2Q9UKU9 493 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 SPAG17Q6Q759 2223 aa24.71■■□□□ 1.55
U2AF1-202ENST00000380276 PTPRJQ12913 1337 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 A0A087X0B3 334 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 LMO2P25791 158 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 PDE6CP51160 858 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 SURF1Q15526 300 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 DUOXA2Q1HG44 320 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 PLA2G2CQ5R387 149 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 FAM171BQ6P995 826 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 DPH6Q7L8W6 267 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 CBWD2Q8IUF1 395 aa24.7■■□□□ 1.54
U2AF1-202ENST00000380276 SDK1Q7Z5N4 2213 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 FRMD3A2A2Y4 597 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 KIAA0391O15091 583 aaKnown RBP24.69■■□□□ 1.54
U2AF1-202ENST00000380276 IFRD2Q12894 506 aaPredicted RBP24.69■■□□□ 1.54
U2AF1-202ENST00000380276 CUL4AQ13619 759 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 MAPRE1Q15691 268 aaKnown RBP24.69■■□□□ 1.54
U2AF1-202ENST00000380276 C2orf27AQ580R0 203 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 DENND5BQ6ZUT9 1274 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 HS2ST1Q7LGA3 356 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 KBTBD7Q8WVZ9 684 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 HPS3Q969F9 1004 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 USP28Q96RU2 1077 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 EDEM2Q9BV94 578 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 CRTAC1Q9NQ79 661 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 ARHGAP26Q9UNA1 814 aa24.69■■□□□ 1.54
U2AF1-202ENST00000380276 SYT1P21579 422 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 MDH1BQ5I0G3 518 aa24.68■■□□□ 1.54
U2AF1-202ENST00000380276 VSTM1Q6UX27 236 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms