RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MIS12Q9H081 205 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 MED4Q9NPJ6 270 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 R3HDM2Q9Y2K5 976 aaKnown RBP20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 SNX24Q9Y343 169 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 FRMPD3Q5JV73 1810 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 ARL5CA6NH57 179 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 MGEA5O60502 916 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 CETN2P41208 172 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 PDE4CQ08493 712 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 LPIN1Q14693 890 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 MFSD7Q6UXD7 560 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 MRPL10Q7Z7H8 261 aaKnown RBP20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 ADGRF2Q8IZF7 708 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 ACSF2Q96CM8 615 aaPredicted RBP20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 SLC4A5Q9BY07 1137 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 DCLK3Q9C098 648 aa20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 DDX56Q9NY93 547 aaKnown RBP20.9■□□□□ 0.94
PDLIM5-205ENST00000380180 SETSIPP0DME0 302 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 KRT10P13645 584 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 CCDC130P13994 396 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 MAP2K2P36507 400 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 FLT3P36888 993 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 SLC25A11Q02978 314 aaKnown RBP20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 TRIM71Q2Q1W2 868 aaKnown RBP20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 ALS2CLQ60I27 953 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 TOP6BLQ8N6T0 577 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 RIN2Q8WYP3 895 aaPredicted RBP20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 RAPGEF5Q92565 580 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 PIWIL1Q96J94 861 aaKnown RBP20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 GIT1Q9Y2X7 761 aa20.89■□□□□ 0.93
PDLIM5-205ENST00000380180 CYB561D2O14569 222 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 GNRH1P01148 92 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ADORA2BP29275 332 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 HSPA9P38646 679 aaKnown RBP20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ADCY2Q08462 1091 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ODF2Q5BJF6 829 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 KAZNQ674X7 775 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 POLNQ7Z5Q5 900 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 TMEM110Q86TL2 294 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 OSTM1Q86WC4 334 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 SLCO2A1Q92959 643 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 GLT1D1Q96MS3 346 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ZNF623O75123 536 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 GABBR2O75899 941 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ECEL1O95672 775 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 WARSP23381 471 aaKnown RBP20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 IL1R2P27930 398 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 COPS2P61201 443 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 DSC3Q14574 896 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 FAM26DQ5JW98 314 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 SPOCD1Q6ZMY3 1216 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 SCUBE3Q8IX30 993 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ANKRD52Q8NB46 1076 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 FAM71BQ8TC56 605 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ZWILCHQ9H900 591 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 HOMER3Q9NSC5 361 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 ZDHHC18Q9NUE0 388 aa20.88■□□□□ 0.93
PDLIM5-205ENST00000380180 HSF2BPO75031 334 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 GRAP2O75791 330 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 RNF8O76064 485 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 INHAP05111 366 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 RPL21P46778 160 aaKnown RBP20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 VEGFBP49765 207 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 SCNN1GP51170 649 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 CLCNKBP51801 687 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 ZNF143P52747 638 aaPredicted RBP20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 ACAP1Q15027 740 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 CCNG2Q16589 344 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 HADHQ16836 314 aaKnown RBP20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 LHX8Q68G74 356 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 TRNP1Q6NT89 227 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 IQCKQ8N0W5 287 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 STK32AQ8WU08 396 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 TRAIPQ9BWF2 469 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 LRRD1A4D1F6 860 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 MOXD2PA6NHM9 499 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 C2CD4BA6NLJ0 364 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 KRT7P08729 469 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 GPD1P21695 349 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 BST2Q10589 180 aaKnown RBP20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 PPP1R7Q15435 360 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 SMTNL2Q2TAL5 461 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 TFDP3Q5H9I0 405 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 KCNT1Q5JUK3 1230 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 WSCD1Q658N2 575 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 OLFML1Q6UWY5 402 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 RNF169Q8NCN4 708 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 RXFP2Q8WXD0 754 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 PIK3R5Q8WYR1 880 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 TNIP3Q96KP6 325 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 ZIM3Q96PE6 472 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 ADAM2Q99965 735 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 FAM118BQ9BPY3 351 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 DNAI2Q9GZS0 605 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 ASNSD1Q9NWL6 643 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 GRHL1Q9NZI5 618 aa20.87■□□□□ 0.93
PDLIM5-205ENST00000380180 A0A0U1RQF3 1178 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 TJP3O95049 919 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 PDGFRAP16234 1089 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 IBSPP21815 317 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms