RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 APOA1P02647 267 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SERPINB1P30740 379 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SPRP35270 261 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 NLRP11P59045 1033 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 DLG4P78352 724 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PLIN5Q00G26 463 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 CUL2Q13617 745 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 KCTD2Q14681 263 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TRIM16LQ309B1 348 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ABI1Q8IZP0 508 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 OR6Y1Q8NGX8 325 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MAGEB5Q9BZ81 275 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MTMR12Q9C0I1 747 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 VPS33BQ9H267 617 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 GTF3C4Q9UKN8 822 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SPATA31D1Q6ZQQ2 1576 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MSH4O15457 936 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 EXTL3O43909 919 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SPAG6O75602 509 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 RARAP10276 462 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PEX5P50542 639 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 FAM83EQ2M2I3 478 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 POU5F2Q8N7G0 328 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SPATA20Q8TB22 786 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ATXN2LQ8WWM7 1075 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TATDN2Q93075 761 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 KIF12Q96FN5 646 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 CHST7Q9NS84 486 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 DTNAQ9Y4J8 743 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SIGLEC1Q9BZZ2 1709 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SHOX2O60902 331 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 NDUFB10O96000 172 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ITGB3P05106 788 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ZSCAN5DPP0CG00 497 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 RAP1GDS1P52306 607 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TMEM62Q0P6H9 643 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TJAP1Q5JTD0 557 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 EFHC1Q5JVL4 640 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 CDKL3Q8IVW4 592 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 NLGN1Q8N2Q7 840 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 NSUN6Q8TEA1 469 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SNX19Q92543 992 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TRAPPC9Q96Q05 1148 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MECRQ9BV79 373 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TIPINQ9BVW5 301 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SAR1AQ9NR31 198 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 AGAP1Q9UPQ3 857 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ADGRA3Q8IWK6 1321 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 M0R3G1 203 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PEX1O43933 1283 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 LGR5O75473 907 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 DGAT1O75907 488 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PSMA4P25789 261 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 KLRK1P26718 216 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PPARGP37231 505 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SULT1E1P49888 294 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ADARP55265 1226 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SPP2Q13103 211 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 XRCC4Q13426 336 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SEL1L3Q68CR1 1132 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PRUNE1Q86TP1 453 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ELMO2Q96JJ3 720 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 RERGLQ9H628 205 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 CHST12Q9NRB3 414 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MCM8Q9UJA3 840 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SALL4Q9UJQ4 1053 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SIK3Q9Y2K2 1263 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SUGT1Q9Y2Z0 365 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TYW5A2RUC4 315 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 GTPBP10A4D1E9 387 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 DEAF1O75398 565 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SMNDC1O75940 238 aaKnown RBP eCLIP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 GZMAP12544 262 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 NCAM1P13591 858 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MSX2P35548 267 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ACAP1Q15027 740 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 RNF220Q5VTB9 566 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PLD3Q8IV08 490 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 INPP5DQ92835 1189 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 PGM2Q96G03 612 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 RPAP3Q9H6T3 665 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 DDX3XO00571 662 aaKnown RBP eCLIP4.35□□□□□ -1.717e-10■■■■■ 46.5
BRCA2-201ENST00000380152 ECE2O60344 883 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SUPT7LO94864 414 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TPI1P60174 286 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MXD4Q14582 209 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TWF2Q6IBS0 349 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 BNIPLQ7Z465 357 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 CBWD2Q8IUF1 395 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 FITM2Q8N6M3 262 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 TDRD5Q8NAT2 981 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 ETNPPLQ8TBG4 499 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 FAM136AQ96C01 138 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 SPATA33Q96N06 139 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 MOV10L1Q9BXT6 1211 aaKnown RBP4.35□□□□□ -1.71
BRCA2-201ENST00000380152 OSBPL7Q9BZF2 842 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 NARFQ9UHQ1 456 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 AFF2P51816 1311 aa4.35□□□□□ -1.71
BRCA2-201ENST00000380152 FER1L4A9Z1Z3 1794 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms