RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 EHD2Q9NZN4 543 aa26.32■■□□□ 1.8
TNFRSF4-201ENST00000379236 TRAF3IP3Q9Y228 551 aa26.32■■□□□ 1.8
TNFRSF4-201ENST00000379236 SP9P0CG40 484 aa26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 NR2F2P24468 414 aa26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 RPL13P26373 211 aaKnown RBP26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 MLLT6P55198 1093 aaPredicted RBP26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 SCARA5Q6ZMJ2 495 aa26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 TMEM150AQ86TG1 271 aa26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 MON1AQ86VX9 555 aa26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 CLDN23Q96B33 292 aa26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 MYRFLQ96LU7 910 aa26.31■■□□□ 1.8
TNFRSF4-201ENST00000379236 VPS13AQ96RL7 3174 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 PRR23AA6NEV1 266 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 ARNTLO00327 626 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 KRT13P13646 458 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 PTPN1P18031 435 aaKnown RBP26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 CLDN10P78369 228 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 CC2D1AQ6P1N0 951 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 GUF1Q8N442 669 aaKnown RBP26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 TTC8Q8TAM2 541 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 TMC2Q8TDI7 906 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 SPATA17Q96L03 361 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 CEP295NLQ96MC4 621 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 XYLT2Q9H1B5 865 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 VRTNQ9H8Y1 702 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 TDP1Q9NUW8 608 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 RMND1Q9NWS8 449 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 FBXO4Q9UKT5 387 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 ATP8B3O60423 1300 aa26.3■■□□□ 1.8
TNFRSF4-201ENST00000379236 ZFHX2Q9C0A1 2572 aaPredicted RBP26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 F5P12259 2224 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 TRAV19A0A0A6YYK7 116 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 C4BPAP04003 597 aaKnown RBP26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 CKMP06732 381 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 PIK3CAP42336 1068 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 DLG4P78352 724 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 LRRC32Q14392 662 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 DENND5BQ6ZUT9 1274 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 ASCL5Q7RTU5 278 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 TTC16Q8NEE8 873 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 LRRC3BQ96PB8 259 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 ELOVL4Q9GZR5 314 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 SEMA4AQ9H3S1 761 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 DPEP3Q9H4B8 488 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 SMYD3Q9H7B4 428 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 LMAN1LQ9HAT1 526 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 GTSE1Q9NYZ3 720 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 R4GN57 208 aa26.29■■□□□ 1.8
TNFRSF4-201ENST00000379236 USP17L7P0C7H9 530 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 TRIM21P19474 475 aaKnown RBP26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 VAMP7P51809 220 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 CSTF1Q05048 431 aaKnown RBP26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 SGSM1Q2NKQ1 1148 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 INTS8Q75QN2 995 aaKnown RBP26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 RALGPS2Q86X27 583 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 B3GALNT2Q8NCR0 500 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 USP13Q92995 863 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 TNIP3Q96KP6 325 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 IER2Q9BTL4 223 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 MED10Q9BTT4 135 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 IMPG2Q9BZV3 1241 aa26.28■■□□□ 1.8
TNFRSF4-201ENST00000379236 SPECC1L-ADORA2AF8WAN1 911 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 IKBKBO14920 756 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 MAPK13O15264 365 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 TADA3O75528 432 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 RAP1GAPP47736 663 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 SOX9P48436 509 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 PDE6CP51160 858 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 PPP2R5DQ14738 602 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 NFIL3Q16649 462 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 ITPRIPL2Q3MIP1 535 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 ZACNQ401N2 412 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 FAM186BQ8IYM0 893 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 TAF4BQ92750 862 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 HOOK1Q9UJC3 728 aaKnown RBP26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 CCL26Q9Y258 94 aa26.27■■□□□ 1.8
TNFRSF4-201ENST00000379236 SHISA7A6NL88 538 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 F8VP50 259 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 VNN1O95497 513 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 CTHP32929 405 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 PSMC2P35998 433 aaKnown RBP26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 CDH8P55286 799 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 ADAM9Q13443 819 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 PNOCQ13519 176 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 ZNF268Q14587 947 aaPredicted RBP26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 ZNF528Q3MIS6 628 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 CHRDQ9H2X0 955 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 GKN1Q9NS71 199 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 TRPM5Q9NZQ8 1165 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 NME7Q9Y5B8 376 aa26.26■■□□□ 1.79
TNFRSF4-201ENST00000379236 SMC2O95347 1197 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 FAM160A1Q05DH4 1040 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 TNK2Q07912 1038 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 IFRD2Q12894 506 aaPredicted RBP26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 MTAPQ13126 283 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 SV2AQ7L0J3 742 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 CCDC150Q8NCX0 1101 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 C8orf48Q96LL4 319 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 ZNF518BQ9C0D4 1074 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 MMRN2Q9H8L6 949 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms