RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 XPAP23025 273 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 AXLP30530 894 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 SP3Q02447 781 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 DRP2Q13474 957 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 MAPRE1Q15691 268 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 TFDP3Q5H9I0 405 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 ITPRIPL1Q6GPH6 555 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 TRMT10CQ7L0Y3 403 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 NT5DC4Q86YG4 428 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 EXD1Q8NHP7 514 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 APBA2Q99767 749 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 FAM167BQ9BTA0 163 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 ATP9BO43861 1147 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 EPHB2P29323 1055 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 RASSF2P50749 326 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 NOGQ13253 232 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 KREMEN1Q96MU8 473 aa14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 AVENQ9NQS1 362 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-203ENST00000378679 CFAP69A5D8W1 941 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 ZNF263O14978 683 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 PMLP29590 882 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 FMO1Q01740 532 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 NR1H3Q13133 447 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 STAT4Q14765 748 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 LONRF1Q17RB8 773 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 DEFB115Q30KQ5 88 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 KDELC2Q7Z4H8 507 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 BRI3BPQ8WY22 251 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 SP110Q9HB58 689 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 USP18Q9UMW8 372 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 C2CD2LO14523 706 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 MAP3K7CLP57077 242 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 PTGISQ16647 500 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 MDH1BQ5I0G3 518 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 SCUBE3Q8IX30 993 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 NUDCD1Q96RS6 583 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 TMEM106CQ9BVX2 250 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 HMX1Q9NP08 348 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 PAEPP09466 180 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 ZBTB41Q5SVQ8 909 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 HGSNATQ68CP4 663 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 TRIM42Q8IWZ5 723 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 DCLK2Q8N568 766 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 ACTL9Q8TC94 416 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 KCNV2Q8TDN2 545 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 USP33Q8TEY7 942 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 PITPNM3Q9BZ71 974 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 RGS17Q9UGC6 210 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 XPO7Q9UIA9 1087 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 TRIM17Q9Y577 477 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 TRPV2Q9Y5S1 764 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 GOLGB1Q14789 3259 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 DCDC2CA8MYV0 355 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 CDH16O75309 829 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 CIB2O75838 187 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 ASS1P00966 412 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 ARL2P36404 184 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 MAGEA4P43358 317 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 ALDH7A1P49419 539 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 CORO7P57737 925 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 OTUD4Q01804 1114 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 BFSP2Q13515 415 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 FAXCQ5TGI0 409 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 MAML3Q96JK9 1138 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 ADAM2Q99965 735 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 SYT15Q9BQS2 421 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 MAF1Q9H063 256 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 DMAC2Q9NW81 257 aa14.82□□□□□ -0.04
SHROOM1-203ENST00000378679 C10orf71Q711Q0 1435 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 MICAL2O94851 1124 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 BST2Q10589 180 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 NFIL3Q16649 462 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 CCDC33Q8N5R6 958 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 SKA2Q8WVK7 121 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 CYTH2Q99418 400 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 VPS11Q9H270 941 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 KRT82Q9NSB4 513 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 PAK5Q9P286 719 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 CHMP2BQ9UQN3 213 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 CDY2AQ9Y6F7 541 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 HNRNPH1P31943 449 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 HSD17B3P37058 310 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 LHX1P48742 406 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 SP2Q02086 613 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 MCL1Q07820 350 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 RPS6KA2Q15349 733 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 SPOCD1Q6ZMY3 1216 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 SLC2A14Q8TDB8 520 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 VPS39Q96JC1 886 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 NTPCRQ9BSD7 190 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 TTYH3Q9C0H2 523 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 MYH3P11055 1940 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 CHUKO15111 745 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 ZSWIM2Q8NEG5 633 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 PCDHA3Q9Y5H8 950 aa14.81□□□□□ -0.04
SHROOM1-203ENST00000378679 GLI3P10071 1580 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 F8VP50 259 aa14.8□□□□□ -0.04
SHROOM1-203ENST00000378679 SPAG7O75391 227 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms