RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 PPP2R2DQ66LE6 453 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 PPP1R2P3Q6NXS1 205 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 H2AFVQ71UI9 128 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 TMC7Q7Z402 723 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 WDTC1Q8N5D0 677 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 KIAA1524Q8TCG1 905 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 SPPL3Q8TCT6 385 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 SMARCD1Q96GM5 515 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 PGLYRP2Q96PD5 576 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 NOX5Q96PH1 765 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 DUSP16Q9BY84 665 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 CERS4Q9HA82 394 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 ENTPD7Q9NQZ7 604 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 TRMT1Q9NXH9 659 aaKnown RBP16.69■□□□□ 0.26
CCDC107-204ENST00000378409 CYTH4Q9UIA0 394 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 TFR2Q9UP52 801 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 PCDHB5Q9Y5E4 795 aa16.69■□□□□ 0.26
CCDC107-204ENST00000378409 GREB1Q4ZG55 1949 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
CCDC107-204ENST00000378409 MYO9BQ13459 2157 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 ZNF638Q14966 1978 aaKnown RBP16.68■□□□□ 0.26
CCDC107-204ENST00000378409 ZSCAN12O43309 604 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 NPR3P17342 541 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 ABCB4P21439 1286 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 RGS7P49802 495 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 GALCP54803 685 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 CREMQ03060 361 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 UBE3AQ05086 875 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 GPR17Q13304 367 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 PDCLQ13371 301 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 SLC8B1Q6J4K2 584 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 RNF19BQ6ZMZ0 732 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 MMS22LQ6ZRQ5 1243 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 CLEC20AQ6ZU45 233 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 ERICH1Q86X53 443 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 PHF13Q86YI8 300 aaPredicted RBP16.68■□□□□ 0.26
CCDC107-204ENST00000378409 GPR65Q8IYL9 337 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
CCDC107-204ENST00000378409 TXLNBQ8N3L3 684 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 POF1BQ8WVV4 589 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 TCF25Q9BQ70 676 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 C11orf70Q9BRQ4 267 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 SYNCQ9H7C4 482 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 SLC28A3Q9HAS3 691 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 TLR9Q9NR96 1032 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 ST7Q9NRC1 585 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC107-204ENST00000378409 ADAM22Q9P0K1 906 aa16.68■□□□□ 0.26
CCDC107-204ENST00000378409 A0A0U1RQJ8 604 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.67■□□□□ 0.26
CCDC107-204ENST00000378409 WDR27A2RRH5 827 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 MTMR11A4FU01 709 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 TULP2O00295 520 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 GRM6O15303 877 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 BEST1O76090 585 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 CXCL14O95715 111 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 CYP2F1P24903 491 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 DNAJB1P25685 340 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 CACNA2D1P54289 1103 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 MAP3K7CLP57077 242 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 ERVFC1P60507 584 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 SMARCB1Q12824 385 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 GPM6BQ13491 265 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
CCDC107-204ENST00000378409 PTPN20Q4JDL3 420 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 C2CD6Q53TS8 623 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 MON1BQ7L1V2 547 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 ZSCAN30Q86W11 494 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 MCOLN2Q8IZK6 566 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
CCDC107-204ENST00000378409 MSANTD4Q8NCY6 345 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 ATRIPQ8WXE1 791 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 ZNF653Q96CK0 615 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 FUBP3Q96I24 572 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC107-204ENST00000378409 PPP1R13BQ96KQ4 1090 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 SMOQ99835 787 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 PRO3102Q9H379 93 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 DMAP1Q9NPF5 467 aaPredicted RBP16.67■□□□□ 0.26
CCDC107-204ENST00000378409 TMEM30AQ9NV96 361 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 FNIP2Q9P278 1114 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 INTUQ9ULD6 942 aa16.67■□□□□ 0.26
CCDC107-204ENST00000378409 MYO7AQ13402 2215 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 ANKRD62A6NC57 917 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 H3BNC9 293 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 XPO1O14980 1071 aaKnown RBP16.66■□□□□ 0.26
CCDC107-204ENST00000378409 CCP110O43303 1012 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 ATMINO43313 823 aaPredicted RBP16.66■□□□□ 0.26
CCDC107-204ENST00000378409 LILRB3O75022 631 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 CALB1P05937 261 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 TMEM253P0C7T8 217 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 MMP8P22894 467 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 NDUFV1P49821 464 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
CCDC107-204ENST00000378409 KIF5AQ12840 1032 aa16.66■□□□□ 0.26
CCDC107-204ENST00000378409 CFAP221Q4G0U5 840 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms